Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-GEOD-40354

ABSTRACT: Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.

OTHER RELATED OMICS DATASETS IN: PRJNA173680

PROVIDER: E-GEOD-40354 | ExpressionAtlas | 2015-12-02

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-GEOD-40354-analysis-methods.tsv	Tabular
	E-GEOD-40354-atlasExperimentSummary.Rdata	Rdata
	E-GEOD-40354-configuration.xml	Xml
	E-GEOD-40354-percentile-ranks.tsv	Tabular
	E-GEOD-40354.condensed-sdrf.tsv	Tabular

Items per page:

1 - 5 of 227

Similar Datasets

Arabidopsis thaliana

Project description:Expression analysis of Arabidopsis peptidoglycan (PGN) recognition mutants treated with PGN

| PRJNA137787 | ENA

GNPS - Expression of kava SPS1, SPS2, and CHS in Arabidopsis thaliana

Project description:Expression of kava SPS1, SPS2, and CHS in Arabidopsis thaliana tt4-2 background.

2018-12-21 | MSV000083272 | GNPS

Arabidopsis thaliana

Project description:Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.

| PRJNA173680 | ENA

The AtGenExpress: Basic hormone treatment of seedlings in Arabidopsis

Project description:Arabidopsis seedlings of the wild-type or hormone mutants were treated with plant hormones.

2012-07-17 | GSE39384 | GEO

Project description:Transcriptomes of MPK mutants / flg22 treated Arabidopsis plants

| PRJNA379910 | ENA

Analysis of arabidopsis mutants tor/lst8/yak1/maktor

Project description:ngs2018_05_tor-analysis of arabidopsis mutants tor/lst8/yak1/maktor-Analysis of Arabidopsis insertion and suppressor mutants linked to the TOR signaling pathway.-Comparison of in vitro grown plantlets for lst8, yak1 mutants and double mutants corresponding to suppressor lines. Comparison of in vitro grown plantlets for mutants affected in LST8 interacting proteins (MAKTOR) compared to wild type.

2019-05-23 | GSE120003 | GEO

Plasma membrane-associated proteins identified in Arabidopsis wild type, lbr2-2 and bak1-4 mutants treated with LPSs from Pseudomonas syringae and Xanthomonas campestris

Project description:We performed label-free LC-MS/MS profile of plasma membrane associated proteins from Arabidopsis thaliana wild type, lbr2-2 and bak1-4 mutants treated with two bacterial LPS chemotypes

2023-05-23 | PXD034031 | JPOST Repository

Arabidopsis mutants

Project description:Arabidopsis mutants

| PRJNA777822 | ENA

Genome-wide analysis of bacterial determinants of plant growth promotion and induced systemic resistance by Pseudomonas fluorescens

Project description:Pseudomonas fluorescens strain SS101 (Pf.SS101) promotes growth of Arabidopsis thaliana, enhances greening and lateral root formation, and induces systemic resistance (ISR) against the bacterial pathogen Pseudomonas syringae pv. tomato (Pst). Here, targeted and untargeted approaches were adopted to identify bacterial determinants and underlying mechanisms involved in plant growth promotion and ISR by Pf.SS101. Based on targeted analyses, no evidence was found for volatiles, lipopeptides and siderophores in plant growth promotion by Pf.SS101. Untargeted, genome-wide analyses of 7,488 random transposon mutants of Pf.SS101 led to the identification of 21 mutants defective in both plant growth promotion and ISR. Many of these mutants, however, were auxotrophic and impaired in root colonization. Genetic analysis of three mutants followed by site-directed mutagenesis, genetic complementation and plant bioassays revealed the involvement of the phosphogluconate dehydratase gene edd, the response regulator gene colR and the adenylsulfate reductase gene cysH in both plant growth promotion and ISR. Subsequent comparative plant transcriptomics analyses strongly suggest that modulation of sulfur assimilation, auxin biosynthesis and transport, steroid biosynthesis and carbohydrate metabolism in Arabidopsis are key mechanisms linked to growth promotion and ISR by Pf.SS101. Comparative transcriptome analysis of Arabidopsis treated with Pf. SS101, a growth and ISR promoting rhizobacteria and plants treated with cysH mutant of Pf.SS101 that fails to induce the afformentioned phenotypes

2017-08-26 | GSE103117 | GEO

Repression of pattern-triggered immunity by the hypoxia response program

Project description:Seedlings of Arabidopsis wild type and ATE1/2 double knock-out mutants were treated with flagellin 22 peptide to elicit pathogen-triggered immunity (PTI) responses. Leaves were harvested and proteome composition assessed.

2024-07-25 | PXD046263 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data