Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-GEOD-55222

ABSTRACT: Transcription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls

OTHER RELATED OMICS DATASETS IN: PRJNA238619PRJNA238903

PROVIDER: E-GEOD-55222 | ExpressionAtlas | 2014-09-02

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-GEOD-55222-analysis-methods.tsv	Tabular
	E-GEOD-55222-atlasExperimentSummary.Rdata	Rdata
	E-GEOD-55222-configuration.xml	Xml
	E-GEOD-55222-percentile-ranks.tsv	Tabular
	E-GEOD-55222.condensed-sdrf.tsv	Tabular

Items per page:

1 - 5 of 59

Similar Datasets

Arabidopsis thaliana seedlings: Wild type vs. sdg8, hub2 and sdg8hub2 mutants

Project description:Transcriptional profiling of 6-day-old seedlings of Arabidopsis wild type control and mutants is performed using Affymetrix IVT Arabidopsis ATH1 Genome Array.

2019-01-21 | GSE109424 | GEO

Arabidopsis thaliana seedlings: Wild type vs. sdg26, atx1, sdg25, clf, ldl1 ldl2 and combined mutants

Project description:Transcriptional profiling of 16-day-old seedlings of Arabidopsis wild type control and mutants is performed using Aligent’s Whole Arabidopsis Gene Expression Microarray (4x44K).

2014-12-22 | GSE55167 | GEO

Evidence that class I glutamine amidotransferase, GAT1_2.1, acts as a glutaminase in roots of Arabidopsis thaliana

Project description:In this study, we use a targeted metabolite quantification approach to demonstrate the difference in quantities of pathway intermediates between wild type Arabidopsis roots and gat1_2.1 mutants using glutamine as organic nitrogen treatment and KNO3 and Glu treatments as negative and positive controls, respectively.

2021-06-01 | ST001811 | MetabolomicsWorkbench

Arabidopsis thaliana seedlings: Wild type vs. zrf1 mutants

Project description:Transcriptional profiling of 6-day-old seedlings of Arabidopsis wild type control and zrf1 mutants is performed using Agilent's Whole Arabidopsis Gene Expression Microarray (4x44K).

2016-12-31 | GSE76244 | GEO

Arabidopsis buds: ahl16 vs. Col-0

Project description:Transcriptional profiling of Arabidopsis buds comparing ahl16 mutants with wild type (Col-0 ecotype). Goal was to determine the differential expression genes between the buds of mutant and wild type.

2014-04-04 | GSE56497 | GEO

Evidence for Antisense Transcription Associated with microRNAs in Arabidopsis

Project description:Exploring miRNA-related antisense transcription in Arabidopsis through RNA transcript profiling of smRNA pathway-defective mutants on a custom high-resolution oligonucleotide array.

2009-04-10 | GSE15199 | GEO

AtFBP7 mutant analysis

Project description:Transcript profiling analysis of AtFBP7 mutant seedlings compared to wild type using Arabidopsis ATH1 GeneChip array. Keywords: 5 day old light grown seedlings, wild type and mutant

2005-12-31 | GSE3864 | GEO

Arabidopsis buds: dyt1 vs Col; tdf1 vs Col; ams vs Col; ms188 vs Col

Project description:Transcriptional profiling of Arabidopsis buds comparing dyt1, tdf1, ams, ms188 mutants with wild type (Col ecotype), respectively. Goal was to determine the differential expression genes between the buds of mutant and wild type.

2017-08-12 | GSE102528 | GEO

Expression data from Arabidopsis mature siliques

Project description:Analysis of the transcriptomes of nearly ripe siliques (18-19 DAP) of the rdo2-1, rdo3 and hub1-2 (rdo4) mutants in comparison with wild-type Ler, using Affymetrix GeneChip Arabidopsis ATH1 Genome Array.

2011-04-08 | GSE28446 | GEO

Arabidopsis wild-type vs. vip3

Project description:Comparison of wild-type and vip3. The Arabidopsis thaliana VERNALIZATION INDEPENDENCE (VIP) gene class has multiple functions in development, including repression of flowering through activation of MADS box gene FLC. Among VIP genes, VIP genes encode yeast Paf1 complex homolog which is required for histone modification, transcriptional elongation. To identify genes regulated by VIP3, we performed Affymetrix Arabidopsis gene chip analysis and compared gene transcription profiles from wild-type and vip3 mutant plants. We found more than 200 genes misregulated in vip3 mutant plants compring to wild-type plant. Keywords: Comparison of wild -type and vip3 mutants

2008-08-30 | GSE10928 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data