Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-GEOD-57449

ABSTRACT: Effect of NJ15 on gene expression profiles in Arabidopsis thaliana seedlings

OTHER RELATED OMICS DATASETS IN: PRJNA246472

PROVIDER: E-GEOD-57449 | ExpressionAtlas | 2015-11-16

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-GEOD-57449-analysis-methods.tsv	Tabular
	E-GEOD-57449-atlasExperimentSummary.Rdata	Rdata
	E-GEOD-57449-configuration.xml	Xml
	E-GEOD-57449-percentile-ranks.tsv	Tabular
	E-GEOD-57449.condensed-sdrf.tsv	Tabular

Items per page:

1 - 5 of 52

Similar Datasets

Arabidopsis thaliana

Project description:Effect of NJ15 on gene expression profiles in Arabidopsis thaliana seedlings

| PRJNA246472 | ENA

The function of CERK1 receptor-like kinase in the chitin elicitor signaling in Arabidopsis

Project description:To see the function of CERK1 receptor-like kinase in the chitin elicitor signaling in Arabidopsis, we compared the gene expression profiles in the chitin oligosaccharide treated seedlings of wild type A. thaliana and CERK1 knock-out mutant. Keywords: Defense response

2008-10-01 | GSE9346 | GEO

Effect of the gi-2 mutation on Arabidopsis thaliana gene expression

Project description:This study aimed to characterize the effect of GIGANTEA loss of function on gene expression in Arabidopsis thaliana seedlings genome-wide. To this end, transcriptomic analyses using high-throughput sequencing were carried out in Col-0 wildtype and gi-2 loss-of-function mutants.

2024-07-25 | GSE237670 | GEO

Arabidopsis thaliana:cyanamid-treated seedlings versus control seedlings

Project description:Transcriptional profiling of Arabidopsis thaliana seedlings treated with cyanamid, highlighting to the physiological function of phytochemicals by observing early response of gene expressions in Arabidopsis seedlings

2013-03-01 | GSE44750 | GEO

Arabidopsis thaliana:goniothalamin-treated seedlings versus control seedlings

Project description:Transcriptional profiling of Arabidopsis thaliana seedlings treated with goniothalamin, highlighting to the physiological function of phytochemicals by observing early response of gene expressions in Arabidopsis seedlings.

2013-03-27 | GSE44749 | GEO

Whole Transcriptome Changes in Arabidopsis Seedlings After 1 h of NAE 18:3 Treatment

Project description:Purpose: The purpose of this experiment was to identify the gene expression changes in Arabidopsis thaliana seedlings induced by 1 h of 100 µM NAE 18:3 treatment. Methods: mRNA profiles of 4-day-old Arabidopsis thaliana seedling were generated by deep sequencing, in triplicate, using Illumina HiSeq. The sequence reads that passed quality filters were analyzed at the transcript level using TopHat followed by Cufflinks. qRT–PCR validation was performed using SYBR Green assays

2020-05-22 | GSE151019 | GEO

GNPS - Expression of kava SPS1, SPS2, and CHS in Arabidopsis thaliana

Project description:Expression of kava SPS1, SPS2, and CHS in Arabidopsis thaliana tt4-2 background.

2018-12-21 | MSV000083272 | GNPS

Arabidopsis thaliana: safranal-treated seedlings versus control seedlings

Project description:Transcriptional profiling of Arabidopsis thaliana seedlings treated with safranal, highlighting to the physiological function of plant volatile chemicals by observing early response of gene expressions in Arabidopsis seedlings.

2016-01-13 | GSE76787 | GEO

Analysis of early transcriptomic response of Arabidopsis seedlings under priming and heat shock

Project description:We evaluated the effect of a pre-treatment at 38°C on the early response (30 min) of Arabidopsis thaliana seedlings to a 43°C treatment

2023-07-13 | GSE236157 | GEO

Effect of high temperature on Arabidopsis thaliana root tips

Project description:Plant roots located in the upper soil layers are prone to experience high temperatures. To gain insight into the effect of high temperature on root development and functioning, we exposed five-day-old Arabidopsis thaliana seedlings grown on agar plates to 30 °C for 48 hours, and compared the gene expression profile in the root tip with that from seedlings that remained at 22 °C.

2024-02-07 | GSE254973 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data