Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MEXP-27

ABSTRACT: Transcription profiling by array of yeast mutants

PROVIDER: E-MEXP-27 | ExpressionAtlas | 2014-07-03

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MEXP-27-analysis-methods.tsv	Tabular
	E-MEXP-27-atlasExperimentSummary.Rdata	Rdata
	E-MEXP-27-configuration.xml	Xml
	E-MEXP-27-configuration.xml.beforeQC	Xml
	E-MEXP-27-percentile-ranks.tsv	Tabular

Items per page:

1 - 5 of 117

Similar Datasets

Saccharomyces cerevisiae

Project description:Transcription profiling by array of yeast single and double deletion mutants of gene-specific transcription factors

| PRJNA182291 | ENA

Evidence for Antisense Transcription Associated with microRNAs in Arabidopsis

Project description:Exploring miRNA-related antisense transcription in Arabidopsis through RNA transcript profiling of smRNA pathway-defective mutants on a custom high-resolution oligonucleotide array.

2009-04-10 | GSE15199 | GEO

[E-MEXP-3786] IGF-I-induced chronic gliosis and retinal stress lead to neurodegeneration in an animal model of retinopathy

Project description:Transcription profiling by array of mouse male retinas to investigate IGF-I-induced chronic gliosis and retinal stress IGF-I exert multiple effects in different retinal cell populations in both physiological and pathological conditions. Transgenic mice overexpressing IGF-I in the retina showed impaired electroretinographic responses at 6-7 months of age that worsen with age. This retinal neuronal dysfunction was correlated with the loss of rod photoreceptors, bipolar, ganglion and amacrines cells. Neuronal alterations were preceded by the overexpression of retinal stress markers, acute phase proteins and gliosis-related genes. IGF-I overexpression leads to chronic gliosis and microgliosis in TgIGF-I retinas, with mild oxidative stress, impaired recycling of glutamate and defective potassium buffering. These impaired supportive functions can contribute to neurodegeneration in TgIGF-I retinas, together with the increased production of pro-inflammatory cytokines, potential mediators of neuronal death.

2013-04-30 | GSE46246 | GEO

The Transposon Insertion site Profiling Chip (TIP-chip)

Project description:We have developed a microarray intended for use in finding all transposons in a region of interest. By selectively amplifying and hybridizing transposon flanking DNA to our array, we can localize all transposons in the region present on our TIP-chip, a dense tiling array. We have tested our technology in yeast and have been successful. Keywords: transposon insertion profiling, genomic DNA, yeast

2007-01-01 | GSE5646 | GEO

Transcription profiling by array of yeast transcription factor double knockouts

Project description:Gene expression profiling was performed on a number of yeast transcription factor double mutants that have a negative genetic interaction score as observed in the transcription factor E-MAP.

2010-12-07 | E-TABM-1030 | biostudies-arrayexpress

Heat-shock molecular chaperone Hsp90 is involved in heterochromatin assembly in Schizosaccharomyces pombe.

Project description:Here, we report the high-throughput profiling of histone modification (H3K9me2) in fission yeast Schizosaccharomyces pombe. We generated genome-wide H3K9me2 maps of fission yeast mutants in swo1-26 (temperature sensitive, ts) cells at 25℃ and 37℃. We find that H3K9me2 enrichment at heterochromatin regions, especially at the mating-type locus and subtelomeres, is compromised, suggesting heterochromatin assembly defects.

2020-06-18 | GSE140617 | GEO

ATR1 Boron Transporter is Regulated by Gcn4 Transcription Factor in Response to Boron Stress

Project description:Transcriptional profiling of yeast wild type BY4741, gcn4 and yap1 mutants in response to boron treatment.

2011-07-20 | GSE29887 | GEO

Mus musculus

Project description:Mouse liver transcription profiling by array

| PRJNA238597 | ENA

Pol II localization in yeast termination mutants

Project description:RNA Polymerase II was mapped over 4% of the yeast genome by ChIP, in wild-type and a handful of mutants in transcriptional termination factors. Keywords: ChIP-chip, transcription termination

2006-11-21 | GSE6301 | GEO

Yeast AlaRS mutants

Project description:Yeast AlaRS mutants

| PRJNA740022 | ENA