Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MEXP-3776

ABSTRACT: Transcription profiling by array of human fibroblast cell line WI38 overexpressiong the SUMO E3 ligase PIASy to analyse transcriptional changes

OTHER RELATED OMICS DATASETS IN: PRJNA179304PRJNA179295PRJNA179305

PROVIDER: E-MEXP-3776 | ExpressionAtlas | 2015-10-22

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MEXP-3776-analysis-methods.tsv	Tabular
	E-MEXP-3776-atlasExperimentSummary.Rdata	Rdata
	E-MEXP-3776-configuration.xml	Xml
	E-MEXP-3776-percentile-ranks.tsv	Tabular
	E-MEXP-3776.condensed-sdrf.tsv	Tabular

Items per page:

1 - 5 of 52

Similar Datasets

E-MEXP-3777

Project description:Transcription profiling by array of Ras-induced human fibroblast cell line WI38 to analyse transcriptional changes in senescent cells

2015-10-22 | E-MEXP-3777 | ExpressionAtlas

The response to ionizing radiation at the exon level

Project description:Humans are exposed to ionizing radiation (IR) from background radiation, medical treatments, occupational and accidental exposures. IR causes profound changes in transcription. Transcription is a primary process where protein amount and function can be regulated. One aspect of the transcriptional IR response that little is known about on a whole genome basis is alternative transcription. These investigations focus on the response to IR at the exon level in human cells but also at the whole gene level. Whole genome exon arrays were utilized to comprehensively characterize radiation-induced transcriptional expression products in two human cell types, namely EBV-transformed lymphoblast and primary fibroblast cell lines. 12 human primary fibroblast cell lines and 12 primary lymphoblast cell line samples were used for two doses (0 and 10 Gy) and two time points (0 and 4hr). Additional doses ( 1 Gy, 2 Gy, 5 Gy, and 20 Gy) and time points ( 1hr, 2hr, 8hr, 24hr and 48hr) were assessed in four lymphoblast cell lines and four primary fibroblasts.

2011-05-02 | E-GEOD-26841 | biostudies-arrayexpress

DNA repair genes: Alternative transcription and gene expression at the exon level in response to the DNA damaging agent, ionizing radiation

Project description:DNA repair is an essential cellular process required to maintain genomic stability. Every cell is subjected to thousands of DNA lesions daily under normal changes in transcription. Transcription is a primary process where protein amount and function can be regulated. One aspect of the transcriptional IR response that little is known about on a whole genome basis is alternative transcription. These investigations focus on the response to IR at the exon level in human cells but also at the whole gene level. Whole genome exon arrays were utilized to comprehensively characterize radiation-induced transcriptional expression products in two human cell types, namely EBV-transformed lymphoblast and primary fibroblast cell lines. 12 human primary fibroblast cell lines and 12 primary lymphoblast cell line samples were used for two doses (0 and 10 Gy) and two time points (0 and 4hr). Additional doses ( 1 Gy, 2 Gy, 5 Gy, and 20 Gy) and time points ( 1hr, 2hr, 8hr, 24hr and 48hr) were assessed in four primary lymphoblast cell lines and four primary fibroblasts.

2012-10-26 | E-GEOD-41840 | biostudies-arrayexpress

Towne induced changes to human foreskin fibroblast transcriptional activity.

Project description:Towne induced changes to human foreskin fibroblast transcriptional activity.

| PRJNA448056 | ENA

Homo sapiens

Project description:Transcriptome of Human 46, XX fibroblast cell line

| PRJNA242985 | ENA

Homo sapiens

Project description:Transcriptome of Human 45, XO fibroblast cell line

| PRJNA242984 | ENA

E-MEXP-3778

Project description:Transcription profiling by array of human fibroblast cell line WI38 expressing shCt or shUbc9 to analyse transcriptionnal changes in cells were sumoylation pathway is inactivated

2015-10-22 | E-MEXP-3778 | ExpressionAtlas

Homo sapiens strain:SuSa

Project description:RNA-seq, 5H4PB treated human skin fibroblast cell line

| PRJDB13296 | ENA

Evolutionary transcriptomics of Eutherian gene expression gains and the origins of decidualization [Set 3]

Project description:We used human endometrial stromal fibroblast cell line to perform an siRNA knockdown coupled with RNA-seq screen of a series of transcription factors that gained expression in the endometrial tissue of Eutherian mammals.

2022-02-28 | GSE189448 | GEO

Evolutionary transcriptomics of Eutherian gene expression gains and the origins of decidualization [Set 2]

2022-02-28 | GSE189430 | GEO