Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MTAB-4260

ABSTRACT: Transcription profiling by high throughput sequencing of wheat developing grains at 4, 8 and 12 days after pollination

OTHER RELATED OMICS DATASETS IN: PRJNA217717

TISSUE(S): Endosperm And Seed Coat, Pericarp

PROVIDER: E-MTAB-4260 | ExpressionAtlas | 2019-01-08

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MTAB-4260-analysis-methods.tsv	Tabular
	E-MTAB-4260-atlasExperimentSummary.Rdata	Rdata
	E-MTAB-4260-coexpressions.tsv.gz	Tabular
	E-MTAB-4260-configuration.xml	Xml
	E-MTAB-4260-factors.xml	Xml

Items per page:

1 - 5 of 39

Similar Datasets

Tissue layers from developing wheat grain at 12 days post-anthesis

Project description:Tissue layers from developing wheat grain at 12 days post-anthesis

| PRJEB7795 | ENA

Tissue layers from developing wheat grain at 12 days post-anthesis

Project description:Inner pericarp, outer pericarp and endosperm layers from developing grain of bread wheat cv. Holdfast at 12 days post-anthesis.

2015-04-24 | E-MTAB-3103 | biostudies-arrayexpress

Comparative transcriptional profiling of developing wheat grains with contrasting levels of minerals

Project description:Transcriptional comparison of developing grains between two wheat genotypes with contrasting levels of minerals in grain, using Affymetrix GeneChipM-BM-. Wheat Genome Array. Gene expression data of two wheat genotypes with high and low grain mineral concentration at two seed development stages (14, and 28 days after anthesis)

2014-10-31 | E-GEOD-56032 | biostudies-arrayexpress

[E-MTAB-552] Transcriptome Analysis of the potato (genotype RH89-039-16)

Project description:Transcription profiling by high throughput sequencing of the potato (genotype RH89-039-16) ArrayExpress Release Date: 2011-07-11 Person Roles: submitter Person Last Name: Soenderkaer Person First Name: Mads Person Mid Initials: Person Email: mson@bio.aau.dk Person Phone: 4530532492 Person Address: Sohngaardsholmsvej 49, 9000 Aalborg, Denmark Person Affiliation: Aalborg University

2011-07-14 | GSE30615 | GEO

Expression profiling of small RNAs in developing wheat grains

Project description:We aimed to identify differentially expressed miRNAs during wheat grain development by using high-throughput sequencing approach. Four small RNA libraries were constructed from wheat grains collected at 7, 14, 21 and 28 days post anthesis (DPA). A total of 165 known miRNAs and 37 novel miRNAs were identified in four small RNA libraries. Moreover, a miRNA-like long hairpin locus was first identified to produce 21~22-nt phased siRNAs. A comparison of the miRNAomes revealed that 55 miRNA families were differentially expressed during the grain development.

2016-01-01 | GSE65797 | GEO

To explore the relationship between new gene expression / mutation and survival of patients in colorectal cancer

Project description:Interventions: Case vs control:No Primary outcome(s): High-throughput sequencing Study Design: Case-Control study

| 2676067 | ecrin-mdr-crc

Expression profiling of small RNAs in developing wheat grains

2016-07-03 | E-GEOD-65797 | biostudies-arrayexpress

[E-MTAB-451] Schistosoma mansoni transcriptomics at different life stages

Project description:High-throughput sequencing of life stages and tissues of the flatworm Schistosoma mansoni to be used for further gene editing, gene finding and transcriptome analysis ArrayExpress Release Date: 2010-12-09 Person Roles: investigator Person Last Name: Protasio Person First Name: Anna Person Mid Initials: V. Person Email: ap6@sanger.ac.uk Person Phone: Person Address: Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, Uk Person Affiliation: Wellcome Trust Sanger Institute Person Roles: submitter Person Last Name: Service Person First Name: Submission Person Mid Initials: Person Email: datahose@sanger.ac.uk Person Phone: Person Address: The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, United Kingdom Person Affiliation: Wellcome Trust Sanger Institute

2011-07-14 | GSE30607 | GEO

[E-MTAB-513] Illumina Human Body Map 2.0 Project

Project description:Illumina bodyMap2 transcriptome Transcription profiling by high throughput sequencing of individual and mixture of 16 human tissues RNA. Additional supplementary files available at foot of this record. Additional information available as supplementary files at the foot of this record. ArrayExpress Release Date: 2011-03-17 Person Roles: submitter Person Last Name: Khrebtukova Person First Name: Irina Person Mid Initials: Person Email: ikhrebtukova@illumina.com Person Phone: 1-510-723-9219 Person Address: 25861 Industrial Blvd, Hayward CA 94545, USA Person Affiliation: Illumina

2011-07-14 | GSE30611 | GEO

Embryos of wheat seeds: Temperature effect

Project description:Transcriptional profiling of wheat embryos of developing seed comparing seeds grown at low temperature:13˚C with seeds grown at high temperature:25˚C during seed development using wheat 2 cultivars: Norin61 (N61) and Shiroganekomugi (SK). Goal was to determine the effects of temperature on global gene expression. Two-condition experiment, Low(13˚C) vs. high (25˚C) temperatures during seed development. Time course experiments along with days after anthesis (DAA).

2011-09-07 | E-GEOD-22786 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data