Dataset Information

Matsuoka2003_VentricularCells_SinoatrialNodePacemaker

ABSTRACT: This a model from the article: Role of individual ionic current systems in ventricular cells hypothesized by a model study. Matsuoka S, Sarai N, Kuratomi S, Ono K, Noma A. Jpn J Physiol 2003 Apr;53(2):105-23 12877767 , Abstract: Individual ion channels or exchangers are described with a common set of equations for both the sinoatrial node pacemaker and ventricular cells. New experimental data are included, such as the new kinetics of the inward rectifier K+ channel, delayed rectifier K+ channel, and sustained inward current. The gating model of Shirokov et al. (J Gen Physiol 102: 1005-1030, 1993) is used for both the fast Na+ and L-type Ca2+ channels. When combined with a contraction model (Negroni and Lascano: J Mol Cell Cardiol 28: 915-929, 1996), the experimental staircase phenomenon of contraction is reconstructed. The modulation of the action potential by varying the external Ca2+ and K+ concentrations is well simulated. The conductance of I(CaL) dominates membrane conductance during the action potential so that an artificial increase of I(to), I(Kr), I(Ks), or I(KATP) magnifies I(CaL) amplitude. Repolarizing current is provided sequentially by I(Ks), I(Kr), and I(K1). Depression of ATP production results in the shortening of action potential through the activation of I(KATP). The ratio of Ca2+ released from SR over Ca2+ entering via I(CaL) (Ca2+ gain = approximately 15) in excitation-contraction coupling well agrees with the experimental data. The model serves as a predictive tool in generating testable hypotheses. This model was taken from the CellML repository and automatically converted to SBML. The original model was: Matsuoka S, Sarai N, Kuratomi S, Ono K, Noma A. (2003) - version=1.0 The original CellML model was created by: Penny Noble penny.noble@dpag.ox.ac.uk The University of Oxford This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team. To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information. In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not. . To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.

SUBMITTER: Camille Laibe

PROVIDER: MODEL1006230058 | BioModels | 2005-01-01

REPOSITORIES: BioModels

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	MODEL1006230058?filename=MODEL1006230058-biopax2.owl	Owl
	MODEL1006230058?filename=MODEL1006230058-biopax3.owl	Owl
	MODEL1006230058?filename=MODEL1006230058.m	Other
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	MODEL1006230058?filename=MODEL1006230058.png	Other

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Publications

Role of individual ionic current systems in ventricular cells hypothesized by a model study.

Matsuoka Satoshi S Sarai Nobuaki N Kuratomi Shinobu S Ono Kyoichi K Noma Akinori A

The Japanese journal of physiology 20030401 2

Individual ion channels or exchangers are described with a common set of equations for both the sinoatrial node pacemaker and ventricular cells. New experimental data are included, such as the new kinetics of the inward rectifier K+ channel, delayed rectifier K+ channel, and sustained inward current. The gating model of Shirokov et al. (J Gen Physiol 102: 1005-1030, 1993) is used for both the fast Na+ and L-type Ca2+ channels. When combined with a contraction model (Negroni and Lascano: J Mol Ce ...[more]

PMID: 12877767

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