Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mechanotransduction Map

ABSTRACT: PAthway representing mechanotransduction

SUBMITTER: Christine Nardini

PROVIDER: MODEL2302150001 | BioModels | 2023-02-23

REPOSITORIES: BioModels

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	MODEL2302150001?filename=basic%20map.xml	Xml
	MODEL2302150001?filename=core%20map.xml	Xml

Items per page:

1 - 2 of 2

Similar Datasets

Heiland2019 - NAD pathway model analysing the impact of NNMT on pathway dynamics and evolution

Project description:This is a detailed model of NAD biosynthesis and consumption representing pathway variances across kingdoms.

2019-07-26 | MODEL1905220001 | BioModels

synthetic construct

Project description:Representing genetic variation with synthetic DNA standards

| PRJNA321434 | ENA

Cronobacter spp. genome sequencing

Project description:Genome sequencing of isolates representing seven Cronobacter species

| PRJEB152 | ENA

Draft genomes of Halobacterium hubeiense isolates

Project description:Draft genomes of seven isolates representing Halobacterium hubeiense

| PRJEB8631 | ENA

Bos taurus strain:Friesian-Jersey Crossbreed

Project description:Bos taurus chromosome 27 sequence representing the AGPAT6 gene

| PRJNA229416 | ENA

Neocallimastigomycota

Project description:Transcriptomes of 22 anaerobic fungal isolates representing 7 genera Transcriptome

| PRJNA489922 | ENA

Testudines

Project description:28 turtle species representing major extant lineages. Targeted Locus (Loci)

| PRJNA254176 | ENA

Transcriptional targets of Hippo signaling in mammalian cells

Project description:The Hippo pathway is an emerging signaling cascade involved in the regulation of organ size control. It consists of evolutionally conserved protein kinases that are sequentially phosphorylated and activated. The active Hippo pathway subsequently phosphorylates a transcription coactivator, YAP, which precludes its nuclear localization and transcriptional activation. Identification of transcriptional targets of YAP in diverse cellular contexts is therefore critical to the understanding of the molecular mechanisms in which the Hippo pathway restricts tissue growth. We used microarrays to profile the gene expression patterns upon acute siRNA knockdown of Hippo pathway components in multiple mammalian cell lines and identified a set of genes representing immediate transcriptional targets of the Hippo/Yap signaling pathway.

2013-12-31 | GSE49384 | GEO

WijayaTrairatphisan2021 - Logic-ODE model of stress signaling in DILI

Project description:We established a comprehensive temporal dynamic response profile of a large set of BAC-GFP HepG2 cell lines representing the following components of stress signaling: i) unfolded protein response (UPR) [ATF4, XBP1, BIP and CHOP]; ii) oxidative stress [NRF2, SRXN1, HMOX1]; iii) DNA damage [P53, P21, BTG2, MDM2]; and iv) NF-κB pathway [A20, ICAM1]. Using logic-based ordinary differential equation (Logic-ODE), we modelled the dynamic profiles of the different stress responses and extracted specific descriptors potentially predicting the progressive outcomes. Please see the most updated version on GitHub: https://github.com/saezlab/LogicODE_GFP_SR

2022-08-02 | MODEL2206070001 | BioModels

Co-expression network analysis of frontal cortex during the progression of Alzheimer’s disease

Project description:Using WGCNA and enrichment analyses to identify pathway level differences between individuals with no cognitive impairment, mild cognitive impairment, and Alzheimer’s disease. Frozen frontal cortex (BA10) tissue from NCI, MCI, and mild/moderate AD cases (n = 12/group) representing both genders was acquired postmortem from participants in the Rush Religious Orders Study, a longitudinal clinical pathologic study of aging and AD in elderly Catholic clergy

2021-10-15 | GSE185909 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data