Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription profiling of human lymphocyte-predominant Hodgkin lymphoma as revealed by global gene expression analysis


ABSTRACT: The pathogenesis of nodular lymphocyte-predominant Hodgkin lymphoma (NLPHL) and its relationship to other lymphomas are largely unknown. This is partly due to the technical challenge of analyzing its rare neoplastic L&H cells, which are dispersed in an abundant non-neoplastic cellular microenvironment. We performed a genome-wide expression study of microdissected lymphocytic and histiocytic (L&H) lymphoma cells in comparison to normal and other malignant B cells, which indicates a relationship of L&H cells to and/or origin from germinal center B cells at transition to memory B cells. L&H cells show a surprisingly high similarity to the tumor cells of T cell-rich B cell lymphoma and classical Hodgkin lymphoma, a partial loss of their B cell phenotype and deregulation of many apoptosis-regulators and putative oncogenes. Importantly, L&H cells are characterized by constitutive NF-κB activity and aberrant ERK signaling. Thus, these findings shed new light on the nature of L&H cells, revealed several novel pathogenetic mechanisms in NLPHL, and may help in differential diagnosis and lead to novel therapeutic strategies. Experiment Overall Design: Analysis of differential gene expression in primary human lymphoma cells of nodular lymphocyte-predominant Hodgkin lymphoma (NLPHL) in comparison with primary lymphoma cells of classical Hodgkin lymphoma cells and other B-non-Hodgkin lymphoma (B-NHL) samples and subsets of non-neoplastic B lymphocytes isolated from blood or tonsils. 67 gene expression profiles were analysed.

ORGANISM(S): Homo sapiens

SUBMITTER: Ralf Küppers 

PROVIDER: E-GEOD-12453 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Origin and pathogenesis of nodular lymphocyte-predominant Hodgkin lymphoma as revealed by global gene expression analysis.

Brune Verena V   Tiacci Enrico E   Pfeil Ines I   Döring Claudia C   Eckerle Susan S   van Noesel Carel J M CJ   Klapper Wolfram W   Falini Brunangelo B   von Heydebreck Anja A   Metzler Dirk D   Bräuninger Andreas A   Hansmann Martin-Leo ML   Küppers Ralf R  

The Journal of experimental medicine 20080915 10


The pathogenesis of nodular lymphocyte-predominant Hodgkin lymphoma (NLPHL) and its relationship to other lymphomas are largely unknown. This is partly because of the technical challenge of analyzing its rare neoplastic lymphocytic and histiocytic (L&H) cells, which are dispersed in an abundant nonneoplastic cellular microenvironment. We performed a genome-wide expression study of microdissected L&H lymphoma cells in comparison to normal and other malignant B cells that indicated a relationship  ...[more]

Similar Datasets

2012-09-17 | E-GEOD-40160 | biostudies-arrayexpress
2019-01-07 | PXD010808 | Pride
2013-07-30 | E-GEOD-44244 | biostudies-arrayexpress
2014-01-17 | E-GEOD-50973 | biostudies-arrayexpress
2012-08-13 | E-GEOD-35219 | biostudies-arrayexpress
2013-03-14 | E-GEOD-44700 | biostudies-arrayexpress
2014-09-10 | E-GEOD-40757 | biostudies-arrayexpress
2010-04-08 | E-GEOD-14409 | biostudies-arrayexpress
2022-02-27 | PXD005075 | Pride
2014-09-10 | E-GEOD-40756 | biostudies-arrayexpress