Unknown,Transcriptomics,Genomics,Proteomics

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High-throughput sequencing of small RNA transcriptomes in Locusta migratoria


ABSTRACT: All the reports on insect small RNAs come from holometabolous insects. However, small RNAs of hemimetabolous insects have not yet been investigated.Study of hemimetabolous insect small RNAs could provide more insights into evolution and function of small RNAs in hemi- and holometabolous insects. The locust is an important, economically harmful hemimetabolous insect and its phase changes is an interesting phenomenon.Here, we used high-throughput sequencing to characterize and compare the small RNA transcriptomes of gregarious and solitary phases in locusts. We found abundant small RNAs and their different expression profiles in the two phases. Small RNAs were sequenced from gregarious and solitary phases of Locusta migratoria,respectively.

ORGANISM(S): Locusta migratoria

SUBMITTER: Yuanyuan Wei 

PROVIDER: E-GEOD-12640 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Characterization and comparative profiling of the small RNA transcriptomes in two phases of locust.

Wei Yuanyuan Y   Chen Shuang S   Yang Pengcheng P   Ma Zongyuan Z   Kang Le L  

Genome biology 20090116 1


<h4>Background</h4>All the reports on insect small RNAs come from holometabolous insects whose genome sequence data are available. Therefore, study of hemimetabolous insect small RNAs could provide more insights into evolution and function of small RNAs in insects. The locust is an important, economically harmful hemimetabolous insect. Its phase changes, as a phenotypic plasticity, result from differential gene expression potentially regulated at both the post-transcriptional level, mediated by  ...[more]

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