Unknown,Transcriptomics,Genomics,Proteomics

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NT roots and NTwithNaB roots and OsHDAC1 roots

ABSTRACT: In conjuction, microarray experiments by using RNA sources from 14-d-old NT and NT with NaB roots and OsHDAC1 overexpressor roots were performed and compared to the microarrays of NT with NaB roots and OsHDAC1 overexpressor roots. Keywords: Epigegetic regulation Two-conditional experiments, NT vs. NTwithNaB and NT vs. OsHDAC1. Biological replications : 3

ORGANISM(S): Oryza sativa

SUBMITTER: Pil joong Chung 

PROVIDER: E-GEOD-13055 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

The histone deacetylase OsHDAC1 epigenetically regulates the OsNAC6 gene that controls seedling root growth in rice.

Chung Pil Joong PJ   Kim Yeon Shic YS   Jeong Jin Seo JS   Park Su-Hyun SH   Nahm Baek Hie BH   Kim Ju-Kon JK  

The Plant journal : for cell and molecular biology 20090504 5

We have previously isolated a rice gene encoding a histone deacetylase, OsHDAC1, and observed that its transgenic overexpression increases seedling root growth. To identify the transcriptional repression events that occur as a result of OsHDAC1 overexpression (OsHDAC1(OE)), a global profiling of root-expressed genes was performed on OsHDAC1(OE) or HDAC inhibitor-treated non-transgenic (NT) roots, in comparison with untreated NT roots. We selected 39 genes that are induced and repressed in HDAC i  ...[more]

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