Global identification of yeast chromosome interactions using genome conformation capture

ABSTRACT: The objective of this study was to determine the global chromosomal interaction map for exponentially growing Saccharomyces cerevisiae cells using Genome Conformation Capture. Interactions between chromosomes were identified within a population of yeast cells growing exponentially in a semi-defined medium containing glucose. The series contains the sequences of the ligated restriction fragments that identified the interactions. A GCC library was prepared, using MspI, from 1.5 x 10^5 cells and sequenced. Data was processed using the Flp_spin_man program suite in conjunction with SOAP (Rodley C.D., Bertels F., Jones B., and O'Sullivan J.M., submitted). The software package initially sorted sequences according to the presence or absence of the MspI restriction site. Sequences containing the

ORGANISM(S): Saccharomyces cerevisiae

SUBMITTER: Justin O'Sullivan 

PROVIDER: E-GEOD-13648 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress