Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Expression profile of splenocytes with glucose-6-phosphate isomerase (GPI) induced arthritis


ABSTRACT: To explore TNF-related genes in GPI-induced arthritis, we performed GeneChip analysis using arthritic splenocytes and control-immunized splenocytes. Among the arrayed TNFalpha-related genes, TIARP mRNA was highly expressed in arthritic splenocytes, with levels exceeding more than 20-times the control splenocytes The spleens of three GPI-GST (MW=89 kD) (300 µg) -immunized DBA/1 mice were harvested on day 10. As a control, the spleens of three GST (MW=26 kd) (100 µg) -immunized DBA/1 mice were used. Total RNA was extracted from the splenocytes using Isogen (Nippon gene), then 15 ug of RNA was utilized for cDNA synthesis by reverse transcription followed by synthesis of biotinylated cRNA through in vitro transcription. After cRNA fragmentation, hybridization with mouse 430A2.0 GeneChip (Affymetrix, Santa Clara, CA) with probes for 43,000 mouse genes ESTs was performed according to the protocol provided by the manufacturer. Analysis was performed by gene expression software

ORGANISM(S): Mus musculus

SUBMITTER: Isao Matsumoto 

PROVIDER: E-GEOD-17272 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Tumor necrosis factor alpha-induced adipose-related protein expression in experimental arthritis and in rheumatoid arthritis.

Inoue Asuka A   Matsumoto Isao I   Tanaka Yoko Y   Iwanami Keiichi K   Kanamori Akihiro A   Ochiai Naoyuki N   Goto Daisuke D   Ito Satoshi S   Sumida Takayuki T  

Arthritis research & therapy 20090806 4


<h4>Introduction</h4>Tumor necrosis factor-alpha (TNFalpha) plays a pivotal role in rheumatoid arthritis (RA); however, the mechanism of action of TNFalpha antagonists in RA is poorly defined. Immunization of DBA/1 mice with glucose-6-phosphate isomerase (GPI) induces severe acute arthritis. This arthritis can be controlled by TNFalpha antagonists, suggesting similar etiology to RA. In this study, we explored TNFalpha-related mechanisms of arthritis.<h4>Methods</h4>First, we performed GeneChip a  ...[more]

Similar Datasets

2009-07-24 | GSE17272 | GEO
2014-09-01 | E-GEOD-56662 | biostudies-arrayexpress
2010-05-05 | E-GEOD-18025 | biostudies-arrayexpress
2023-09-29 | E-MTAB-13333 | biostudies-arrayexpress
2022-08-30 | GSE212263 | GEO
2022-08-30 | GSE212262 | GEO
| PRJNA105037 | ENA
| PRJNA105041 | ENA
2007-12-07 | E-GEOD-4479 | biostudies-arrayexpress
| PRJNA105043 | ENA