Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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CDK inhibitors and flavopiridol profiling on A2780 and MCF7 cells


ABSTRACT: This SuperSeries is composed of the following subset Series: GSE18486: CDK inhibitors PHA-848125 and PHA-690509 profiling on A2780 GSE18498: CDK inhibitor PHA-793887 profiling on A2780 GSE18501: CDK inhibitor PHA-848125 gene expression profiling on MCF7 cell line GSE18504: Flavopiridol profiling on A2780 GSE19638: Compounds profiling on MCF7 Refer to individual Series

ORGANISM(S): Homo sapiens

SUBMITTER: Roberta Bosotti 

PROVIDER: E-GEOD-18552 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Discovery of drug mode of action and drug repositioning from transcriptional responses.

Iorio Francesco F   Bosotti Roberta R   Scacheri Emanuela E   Belcastro Vincenzo V   Mithbaokar Pratibha P   Ferriero Rosa R   Murino Loredana L   Tagliaferri Roberto R   Brunetti-Pierri Nicola N   Isacchi Antonella A   di Bernardo Diego D  

Proceedings of the National Academy of Sciences of the United States of America 20100802 33


A bottleneck in drug discovery is the identification of the molecular targets of a compound (mode of action, MoA) and of its off-target effects. Previous approaches to elucidate drug MoA include analysis of chemical structures, transcriptional responses following treatment, and text mining. Methods based on transcriptional responses require the least amount of information and can be quickly applied to new compounds. Available methods are inefficient and are not able to support network pharmacolo  ...[more]

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