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Genome-wide nucleosome position data for 12 yeast species

ABSTRACT: We mapped nucleosome positions genome-wide in 12 Ascomycetes Illumina sequencing of mononucleosomal DNA isolated from mid-log cultures grown in rich medium (abbreviated CM, in house recipe)

ORGANISM(S): Candida albicans

SUBMITTER: Alex Tsankov

PROVIDER: E-GEOD-22211 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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The role of nucleosome positioning in the evolution of gene regulation.

Tsankov Alexander M AM Thompson Dawn Anne DA Socha Amanda A Regev Aviv A Rando Oliver J OJ

PLoS biology 20100706 7

Chromatin organization plays a major role in gene regulation and can affect the function and evolution of new transcriptional programs. However, it can be difficult to decipher the basis of changes in chromatin organization and their functional effect on gene expression. Here, we present a large-scale comparative genomic analysis of the relationship between chromatin organization and gene expression, by measuring mRNA abundance and nucleosome positions genome-wide in 12 Hemiascomycota yeast spec ...[more]

PMID: 20625544

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