Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Primary human erythroid progenitor cells SAHA treatment samples


ABSTRACT: Gene expression profiling was performed on primary human erythroid progenitor cells left untreated or treated with 0.5uM SAHA. The worldwide burden of sickle cell disease is enormous, with over 200,000 infants born with the disease each year in Africa alone. Induction of fetal hemoglobin is a validated strategy to improve symptoms and complications of this disease. The development of targeted therapies has been limited by the absence of discrete druggable targets. We developed a novel bead-based strategy for the identification of inducers of fetal hemoglobin transcripts in primary human erythroid cells. A small-molecule screen of bioactive compounds identified remarkable class-associated activity among histone deacetylase (HDAC) inhibitors. Using a chemical genetic strategy combining focused libraries of biased chemical probes and reverse genetics by RNA interference, we have identified HDAC1 and HDAC2 as molecular targets mediating fetal hemoglobin induction. Our findings suggest the potential of isoform-selective inhibitors of HDAC1 and HDAC2 for the treatment of sickle cell disease. Gene expression profiling was performed on primary human erythroid progenitor cells left untreated (n=3) or treated with 0.5uM SAHA (n=3).

ORGANISM(S): Homo sapiens

SUBMITTER: Benjamin Ebert 

PROVIDER: E-GEOD-22367 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Chemical genetic strategy identifies histone deacetylase 1 (HDAC1) and HDAC2 as therapeutic targets in sickle cell disease.

Bradner James E JE   Mak Raymond R   Tanguturi Shyam K SK   Mazitschek Ralph R   Haggarty Stephen J SJ   Ross Kenneth K   Chang Cindy Y CY   Bosco Jocelyn J   West Nathan N   Morse Elizabeth E   Lin Katherine K   Shen John Paul JP   Kwiatkowski Nicholas P NP   Gheldof Nele N   Dekker Job J   DeAngelo Daniel J DJ   Carr Steven A SA   Schreiber Stuart L SL   Golub Todd R TR   Ebert Benjamin L BL  

Proceedings of the National Academy of Sciences of the United States of America 20100628 28


The worldwide burden of sickle cell disease is enormous, with over 200,000 infants born with the disease each year in Africa alone. Induction of fetal hemoglobin is a validated strategy to improve symptoms and complications of this disease. The development of targeted therapies has been limited by the absence of discrete druggable targets. We developed a unique bead-based strategy for the identification of inducers of fetal hemoglobin transcripts in primary human erythroid cells. A small-molecul  ...[more]

Similar Datasets

2010-07-29 | E-GEOD-22366 | biostudies-arrayexpress
2010-06-28 | GSE22367 | GEO
2010-07-29 | E-GEOD-22368 | biostudies-arrayexpress
2010-07-29 | E-GEOD-22369 | biostudies-arrayexpress
2010-06-28 | GSE22366 | GEO
2010-06-28 | GSE22368 | GEO
2016-01-31 | GSE70120 | GEO
| PRJNA127679 | ENA
2024-08-08 | GSE256494 | GEO
2016-04-11 | GSE60792 | GEO