Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Whole-genome gene expression profiles of non-tumorous human lung tissues: Laval set

ABSTRACT: We profiled genome-wide gene expression in non-tumorous human lung tissues. The overall goal of this project is to improve our molecular understanding of various lung diseases including lung cancer and chronic obstructive pulmonary disease (COPD). Lung specimens were obtained from patients undergoing lung cancer surgery at the Institut Universitaire de Cardiologie et de Pneumologie de Québec. All lung specimens were derived from a homogeneous piece of peripheral tissue free of tumour obtained at surgery performed between April 2004 and December 2008. These lung tissues were stored in the biobank of the Respiratory Health Network of the FRSQ, site Institut Universitaire de Cardiologie et de Pneumologie de Québec. The time from surgical removal to freezing was between 15 to 30 minutes. RNAs were extracted and then hybridized to a single custom-made whole-genome human Affymetrix array.

ORGANISM(S): Homo sapiens

SUBMITTER: Yohan Bossé 

PROVIDER: E-GEOD-23352 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

Cigarette smoking is the leading risk factor for lung cancer. To identify genes deregulated by smoking and to distinguish gene expression changes that are reversible and persistent following smoking cessation, we carried out genome-wide gene expression profiling on nontumor lung tissue from 853 patients with lung cancer. Gene expression levels were compared between never and current smokers, and time-dependent changes in gene expression were studied in former smokers. A total of 3,223 transcript  ...[more]

Similar Datasets

Transcriptomics Whole-genome gene expression profiles of non-tumorous human lung tissues: UBC set
2012-06-10 | E-GEOD-23529 | biostudies-arrayexpress
Transcriptomics Whole-genome gene expression profiles of non-tumorous human lung tissues: GRNG set
2012-06-10 | E-GEOD-23545 | biostudies-arrayexpress
Transcriptomics Whole-genome gene expression profiles of non-tumorous human lung tissues
2012-06-10 | E-GEOD-23546 | biostudies-arrayexpress
Transcriptomics Microarray-based gene expression on human aortic valves
2018-03-14 | GSE102249 | GEO
Proteomics Quantitative proteomic dataset from oro- and naso-pharyngeal swabs used for COVID-19 diagnosis: detection of viral proteins and host’s biological processes altered by the infection
2020-07-28 | PXD020394 | Pride
Transcriptomics Transcriptome profiling of 57 LUAD samples and 11 peritumoral normal lung tissues
2019-09-04 | GSE116959 | GEO
Transcriptomics Cryobiopsy: A Breakthrough Strategy for Clinical Utilization of Lung Cancer Organoids
2023-07-07 | GSE230537 | GEO
Transcriptomics Microarray of neural progenitor cells from neonatal lung injury mice treated with placebo or umbilical-cord mesenchymal stromal cell extracellular vesicles or untreated, as well as age-matched control mice
2022-05-17 | E-MTAB-11157 | biostudies-arrayexpress
Transcriptomics MicroRNAs Implicated in Dysregulation of Gene Expression Following Human Lung Transplantation
2014-07-20 | E-GEOD-49081 | biostudies-arrayexpress
Transcriptomics Gene expression profiling of murine innate lymphoid cells
2013-04-30 | E-GEOD-46468 | biostudies-arrayexpress