Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Cell-type, developmental stage, and whole root responses to low pH and sulfur deficiency


ABSTRACT: This SuperSeries is composed of the following subset Series: GSE30091: Expression analysis of the effect of protoplasting and sorting in roots exposed to low pH GSE30095: Expression analysis of root cell types after treatment with low pH GSE30096: Expression analysis of developmental stages of Arabidopsis roots exposed to low pH GSE30097: Time-course expression analysis of the low pH (pH 4.6) response in Arabidopsis whole roots GSE30098: Expression analysis time-course of Arabidopsis roots to sulfur deficiency GSE30099: Expression analysis of root cell types after treatment with sulfur deficient media GSE30100: Expression analysis of developmental stages of Arabidopsis roots exposed to sulfur deficient media GSE30104: Genome-wide identification of SCARECROW (SCR) direct targets using a custom Agilent promoter array Refer to individual Series

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Anjali Iyer-Pascuzzi 

PROVIDER: E-GEOD-30166 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Cell identity regulators link development and stress responses in the Arabidopsis root.

Iyer-Pascuzzi Anjali S AS   Jackson Terry T   Cui Hongchang H   Petricka Jalean J JJ   Busch Wolfgang W   Tsukagoshi Hironaka H   Benfey Philip N PN  

Developmental cell 20111001 4


Stress responses in plants are tightly coordinated with developmental processes, but interaction of these pathways is poorly understood. We used genome-wide assays at high spatiotemporal resolution to understand the processes that link development and stress in the Arabidopsis root. Our meta-analysis finds little evidence for a universal stress response. However, common stress responses appear to exist with many showing cell type specificity. Common stress responses may be mediated by cell ident  ...[more]

Similar Datasets

2011-11-23 | E-GEOD-30091 | biostudies-arrayexpress
2011-11-23 | E-GEOD-30097 | biostudies-arrayexpress
2011-11-23 | E-GEOD-30096 | biostudies-arrayexpress
2011-11-23 | E-GEOD-30095 | biostudies-arrayexpress
2011-11-23 | E-GEOD-30098 | biostudies-arrayexpress
2011-11-23 | E-GEOD-30100 | biostudies-arrayexpress
2008-06-15 | E-GEOD-7639 | biostudies-arrayexpress
2011-11-23 | E-GEOD-30099 | biostudies-arrayexpress
2008-06-16 | E-GEOD-8787 | biostudies-arrayexpress
2009-06-23 | E-GEOD-16468 | biostudies-arrayexpress