Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

Adaptation to famine


ABSTRACT: Bacterial adaptation to nutrient limitation and increased population densities is central to survival and virulence. Surprisingly, <3% of Escherichia coli genes are known to play roles specific to the stationary phase. There is evidence that the leucine-responsive regulatory protein (Lrp) may play an important role in stationary phase, so this study used microarrays representing >98% of E. coli genes to more comprehensively identify those controlled by Lrp. The primary analysis compared isogenic Lrp(+) and Lrp(-) strains in cells growing in steady state in glucose minimal medium, either in the presence or absence of leucine. More than 400 genes were significantly Lrp-responsive under the conditions used. Transcription of 147 genes was lower in Lrp(+) than in Lrp(-) cells whether or not leu

ORGANISM(S): Escherichia coli

SUBMITTER: Arkady Khodursky 

PROVIDER: E-GEOD-3283 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress