Ontology highlight
ABSTRACT:
ORGANISM(S): Mus musculus
SUBMITTER: Manuel Garber
PROVIDER: E-GEOD-36103 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
Garber Manuel M Yosef Nir N Goren Alon A Raychowdhury Raktima R Thielke Anne A Guttman Mitchell M Robinson James J Minie Brian B Chevrier Nicolas N Itzhaki Zohar Z Blecher-Gonen Ronnie R Bornstein Chamutal C Amann-Zalcenstein Daniela D Weiner Assaf A Friedrich Dennis D Meldrim James J Ram Oren O Cheng Christine C Gnirke Andreas A Fisher Sheila S Friedman Nir N Wong Bang B Bernstein Bradley E BE Nusbaum Chad C Hacohen Nir N Regev Aviv A Amit Ido I
Molecular cell 20120830 5
Understanding the principles governing mammalian gene regulation has been hampered by the difficulty in measuring in vivo binding dynamics of large numbers of transcription factors (TF) to DNA. Here, we develop a high-throughput Chromatin ImmunoPrecipitation (HT-ChIP) method to systematically map protein-DNA interactions. HT-ChIP was applied to define the dynamics of DNA binding by 25 TFs and 4 chromatin marks at 4 time-points following pathogen stimulus of dendritic cells. Analyzing over 180,00 ...[more]