Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Comparative profiling of human fetal and adult erythropoiesis


ABSTRACT: This SuperSeries is composed of the following subset Series: GSE36984: Expression Profiling of Primary Human Fetal and Adult Hematopoietic Stem/Progenitor Cells (HSPCs) and Differentiating Proerythroblasts (ProEs) GSE36985: Comparative profiling of chromatin state maps and transcription factor occupancy during human fetal and adult erythropoiesis GSE36988: Expression Profiling of Primary Human Proerythroblasts (ProEs) After IRF2, IRF6, and MYB shRNA Knockdown Refer to individual Series

ORGANISM(S): Homo sapiens

SUBMITTER: Jian Xu 

PROVIDER: E-GEOD-36994 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Combinatorial assembly of developmental stage-specific enhancers controls gene expression programs during human erythropoiesis.

Xu Jian J   Shao Zhen Z   Glass Kimberly K   Bauer Daniel E DE   Pinello Luca L   Van Handel Ben B   Hou Serena S   Stamatoyannopoulos John A JA   Mikkola Hanna K A HK   Yuan Guo-Cheng GC   Orkin Stuart H SH  

Developmental cell 20121004 4


Gene-distal enhancers are critical for tissue-specific gene expression, but their genomic determinants within a specific lineage at different stages of development are unknown. Here we profile chromatin state maps, transcription factor occupancy, and gene expression profiles during human erythroid development at fetal and adult stages. Comparative analyses of human erythropoiesis identify developmental stage-specific enhancers as primary determinants of stage-specific gene expression programs. W  ...[more]

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