Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Whole DNA methylome profiling in mice exposed to secondhand smoke


ABSTRACT: A large body of evidence has linked secondhand smoke (SHS) to lung cancer in nonsmokers. Yet, the underlying mechanisms of SHS carcinogenicity in nonsmokers' lung cancer remain elusive. Recently, we have demonstrated a genotoxic mode of action for SHS, based on the ability of this carcinogen to induce adduct-driven mutagenesis in transgenic Big Blue® mice. In the present study, we have expanded this investigation to determine whether SHS can also cause epigenetic effects through aberrations of DNA methylation. Here, we have globally profiled DNA methylation in the lung of Big Blue® mice exposed to SHS for a duration of 4-months, both immediately after the termination of exposure and at several intervals post-exposure. We have used a genome-wide microarray-based approach to catalogue DNA methylation profile in the lung of mice exposed to SHS and at various recovery periods from the time of exposure. Mice exposed to clean air, for comparable amount of times, were used as controls. Mice that were injected intraperitoneally with chronic doses of B(a)P (a powerful carcinogen in SHS) or DMSO (sham) were used for comparison purposes .

ORGANISM(S): Mus musculus

SUBMITTER: Xiwei Wu 

PROVIDER: E-GEOD-41421 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Whole DNA methylome profiling in mice exposed to secondhand smoke.

Tommasi Stella S   Zheng Albert A   Yoon Jae-In JI   Li Arthur Xuejun AX   Wu Xiwei X   Besaratinia Ahmad A  

Epigenetics 20121010 11


Aberration of DNA methylation is a prime epigenetic mechanism of carcinogenesis. Aberrant DNA methylation occurs frequently in lung cancer, with exposure to secondhand smoke (SHS) being an established risk factor. The causal role of SHS in the genesis of lung cancer, however, remains elusive. To investigate whether SHS can cause aberrant DNA methylation in vivo, we have constructed the whole DNA methylome in mice exposed to SHS for a duration of 4 mo, both after the termination of exposure and a  ...[more]

Similar Datasets

2012-11-29 | GSE41421 | GEO
2013-06-30 | GSE41422 | GEO
2013-06-30 | E-GEOD-41422 | biostudies-arrayexpress
2009-04-23 | E-GEOD-5127 | biostudies-arrayexpress
2010-04-29 | GSE21532 | GEO
2010-04-29 | E-GEOD-21532 | biostudies-arrayexpress
2020-12-31 | GSE132661 | GEO
2013-10-01 | GSE28368 | GEO
2011-06-01 | E-GEOD-28368 | biostudies-arrayexpress
2008-06-14 | E-GEOD-6116 | biostudies-arrayexpress