Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

The effect of transcription factor AtfA on gene expression


ABSTRACT: We report the effect of the deletion of novel RNA polymerase binding protein AtfA on genome-wide transcription in Acinetobacter baylyi ADP1. Compared the transcription profile of wt vs atfA knockout in Acinetobacter baylyi ADP1 using RNA-seq.

ORGANISM(S): Acinetobacter sp. ADP1

SUBMITTER: Peter Lewis 

PROVIDER: E-GEOD-42973 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

AtfA, a new factor in global regulation of transcription in Acinetobacter spp.

Withers Ryan R   Doherty Geoff P GP   Jordan Matthew M   Yang Xiao X   Dixon Nicholas E NE   Lewis Peter J PJ  

Molecular microbiology 20140731 6


Acinetobacter species are widely distributed bacteria in the environment, and have recently gained notoriety as opportunistic nosocomial pathogens. Here we characterize a novel RNA polymerase-interacting protein named acidic transcription factor A, AtfA. It is small and highly acidic, and is widely distributed throughout the γ proteobacteria, including other significant pathogens in the genera Moraxella, Pseudomonas, Legionella and Vibrio. In the model species A. baylyi ADP1, deletion of atfA si  ...[more]

Similar Datasets

2014-07-28 | GSE42973 | GEO
2011-08-11 | E-GEOD-31206 | biostudies-arrayexpress
2016-03-01 | E-GEOD-66773 | biostudies-arrayexpress
2018-10-27 | PXD004634 | Pride
2022-09-14 | E-MTAB-11607 | biostudies-arrayexpress
2020-05-22 | PXD016618 | Pride
2016-03-09 | E-GEOD-69186 | biostudies-arrayexpress
2015-08-21 | E-GEOD-67910 | biostudies-arrayexpress
2014-04-28 | E-GEOD-51900 | biostudies-arrayexpress
2015-01-20 | E-GEOD-64974 | biostudies-arrayexpress