Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Antiviral RNA interference in mammalian cells


ABSTRACT: Plants and invertebrates protect themselves from viruses through RNA interference (RNAi), yet it remains unknown whether this defense mechanism exists in mammals. Antiviral RNAi involves the processing of viral long double-stranded (ds) RNA molecules into small interfering RNAs (siRNAs) by the ribonuclease (RNAse) III Dicer. These siRNAs are incorporated into effector complex(es) containing members of the Argonaute (Ago) protein family and guide silencing of complementary target viral RNAs. Here, we detect the accumulation of phased Dicer-dependent virus-derived siRNA (viRNAs) and demonstrate their loading into Ago2 after infection of mouse embryonic stem (ES) cells with Encephalomyocarditis virus (EMCV). We further show that the production of these viRNAs is drastically reduced, yet not completely abolished, if ES cells are first induced to differentiate before infection. Finally, we reveal that the mammalian virus Nodamura virus (NoV) encodes for a protein that counteracts such antiviral RNAi in ES cells supporting the existence of an effective RNAi-based immunity in mammals. Infection of wild-type or mutant mouse ES cells and analysis of small RNAs from total extracts or immunoprecipitated components of the RNAi pathway

ORGANISM(S): Mus musculus

SUBMITTER: Antonin Marchais 

PROVIDER: E-GEOD-43153 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Antiviral RNA interference in mammalian cells.

Maillard P V PV   Ciaudo C C   Marchais A A   Li Y Y   Jay F F   Ding S W SW   Voinnet Olivier O  

Science (New York, N.Y.) 20131001 6155


In antiviral RNA interference (RNAi), the DICER enzyme processes virus-derived double-stranded RNA (dsRNA) into small interfering RNAs (siRNAs) that guide ARGONAUTE proteins to silence complementary viral RNA. As a counterdefense, viruses deploy viral suppressors of RNAi (VSRs). Well-established in plants and invertebrates, the existence of antiviral RNAi remains unknown in mammals. Here, we show that undifferentiated mouse cells infected with encephalomyocarditis virus (EMCV) or Nodamura virus  ...[more]

Similar Datasets

2013-12-11 | E-GEOD-43110 | biostudies-arrayexpress
2012-03-01 | E-GEOD-35368 | biostudies-arrayexpress
2012-04-03 | E-GEOD-32294 | biostudies-arrayexpress
2010-06-24 | E-GEOD-13212 | biostudies-arrayexpress
2013-10-10 | GSE43153 | GEO
2013-12-24 | E-GEOD-48446 | biostudies-arrayexpress
2012-04-03 | E-GEOD-32288 | biostudies-arrayexpress
2011-04-08 | E-GEOD-19588 | biostudies-arrayexpress
2012-12-11 | E-GEOD-41721 | biostudies-arrayexpress
2012-04-03 | E-GEOD-32287 | biostudies-arrayexpress