Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

RNAseq analysis of the serotype M1 group A Streptococcus strain MGAS2221


ABSTRACT: We recovered RNA from exponential and stationary phase cell cultures of MGAS2221 and utilized two distinct methods to remove rRNA from our samples, the RiboZero kit from Epicenter, and the terminator- 5--Phosphate-Dependent Exonuclease (TEX). This gave us 4 distinct RNAs with which we performed RNAseq analysis. Both rRNA removal methods worked well, with only a small percentage of the final total read counts being derived from rRNA sequences. A single group A Streptococcus strain was investigated.

ORGANISM(S): Streptococcus pyogenes

SUBMITTER: Paul Sumby 

PROVIDER: E-GEOD-45325 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2013-03-26 | E-GEOD-45298 | biostudies-arrayexpress
2013-03-26 | E-GEOD-45443 | biostudies-arrayexpress
2013-03-26 | E-GEOD-45444 | biostudies-arrayexpress
2013-03-26 | E-GEOD-45445 | biostudies-arrayexpress
2015-03-03 | E-GEOD-66443 | biostudies-arrayexpress
2010-05-26 | E-GEOD-9793 | biostudies-arrayexpress
2014-11-30 | E-MTAB-2851 | biostudies-arrayexpress
2009-08-25 | E-GEOD-17767 | biostudies-arrayexpress
2013-03-20 | GSE45325 | GEO
2010-06-11 | E-GEOD-7525 | biostudies-arrayexpress