Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of Arabidopsis wild-type, ago1-10, ago1-11, and dcl1-9 ec. Landsberg erecta seedling at 9, 21, and 35 days after germination reveals miRNA-Targeted and siRNA-Mediated mRNA Degradation Regulated by Argonaute, Dicer and RdRP


ABSTRACT: Microarray expression profiles of wild-type, ago1-10, ago1-11, and dcl1-9 Arabidopsis thaliana ec. Landsberg erecta seedling at 9, 21, and 35 days after germination. Experiment Overall Design: Reference design, wild-type vs mutants, multiple biological replicates

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Matthew Wayne Vaughn 

PROVIDER: E-GEOD-4684 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

MicroRNA-targeted and small interfering RNA-mediated mRNA degradation is regulated by argonaute, dicer, and RNA-dependent RNA polymerase in Arabidopsis.

Ronemus Michael M   Vaughn Matthew W MW   Martienssen Robert A RA  

The Plant cell 20060623 7


ARGONAUTE1 (AGO1) of Arabidopsis thaliana mediates the cleavage of microRNA (miRNA)-targeted mRNAs, and it has also been implicated in the posttranscriptional silencing of transgenes and the maintenance of chromatin structure. Mutations in AGO1 severely disrupt plant development, indicating that miRNA function and possibly other aspects of RNA interference are essential for maintaining normal patterns of gene expression. Using microarrays, we found that 1 to 6% of genes display significant expre  ...[more]

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