Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Evaluation of technical (array-to-array) reproducibility of L. vannamei microarray


ABSTRACT: Five aliquots of the same RNA sample were labeled and hybridized in parallel to the L. vannamei microarray, in order to assess the technical reproducibility of the tool Keywords: technical validation A sample of gill total RNA was divided in 5 identical aliquots, and each aliquot was labeled and hybridized to an array. The co-relation among the global expression profiles obtained was assessed.

ORGANISM(S): Litopenaeus vannamei

SUBMITTER: Yian Chen 

PROVIDER: E-GEOD-4954 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Insights into the immune transcriptome of the shrimp Litopenaeus vannamei: tissue-specific expression profiles and transcriptomic responses to immune challenge.

Robalino Javier J   Almeida Jonas S JS   McKillen David D   Colglazier Joan J   Trent Harold F HF   Chen Yian Ann YA   Peck Megan E T ME   Browdy Craig L CL   Chapman Robert W RW   Warr Gregory W GW   Gross Paul S PS  

Physiological genomics 20061205 1


Infectious disease constitutes a major obstacle to the sustainability of shrimp aquaculture worldwide and a significant threat to natural populations of shrimp and other crustacea. The study of the shrimp immune system, including the response to viral infection, has been hampered by a relative lack of molecular genetic information and of tools suitable for high-throughput assessment of gene expression. In this report, the generation of a cDNA microarray encompassing 2,469 putative unigenes expre  ...[more]

Similar Datasets

2010-07-01 | E-GEOD-4955 | biostudies-arrayexpress
2006-04-01 | E-GEOD-4580 | biostudies-arrayexpress
2010-07-01 | E-GEOD-5293 | biostudies-arrayexpress
2010-07-01 | E-GEOD-4949 | biostudies-arrayexpress
2010-06-11 | E-GEOD-2674 | biostudies-arrayexpress
2010-06-24 | E-GEOD-9671 | biostudies-arrayexpress
2010-06-11 | E-GEOD-5986 | biostudies-arrayexpress
2003-02-04 | E-GEOD-274 | biostudies-arrayexpress
2010-06-10 | E-GEOD-2412 | biostudies-arrayexpress
2010-06-05 | E-GEOD-1970 | biostudies-arrayexpress