Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Expression data after BCLAF1-L knockdown in human RKO cells


ABSTRACT: Bcl-2-accociated transcription factor 1(BCLAF1) has been reported to be involved in diverse biological processes. Alternative splicing leads to mutiple transcript virants in human cells and we are interested in functions of its full length isoform(BCLAF1-L) in human colon cancer cells, thus to understanding its role in colon cancer progression. We used microarray to detail the global programme of gene expression after BCLAF1-L knockdown(sh-BCLAF1-L#1) in RKO cells and identified distinct classes of up-regulated or down-regulated genes impaired by its inhibition, when comparing with the control group(sh-Luci). RKO cells were infected with retroviruses either expressing control (sh-Luci) or BCLAF1-L knockdown (sh-BCLAF1-L#1). Medium was replaced 24h after infection, and infected cells were selected by the addition of puromycin (2ug/ml) for 72-96h. Then cells were havested for RNA extraction and hybridization on Affymetrix microarrays.

ORGANISM(S): Homo sapiens

SUBMITTER: Feng Ying 

PROVIDER: E-GEOD-52990 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2013-12-05 | GSE52990 | GEO
2011-09-29 | E-GEOD-31440 | biostudies-arrayexpress
2010-05-06 | E-GEOD-18929 | biostudies-arrayexpress
2004-11-01 | E-MEXP-101 | biostudies-arrayexpress
2013-01-01 | E-GEOD-26684 | biostudies-arrayexpress
2013-01-01 | E-GEOD-26433 | biostudies-arrayexpress
2017-06-17 | E-MTAB-5184 | biostudies-arrayexpress
2009-09-04 | E-GEOD-9169 | biostudies-arrayexpress
2011-07-01 | E-GEOD-29900 | biostudies-arrayexpress
2021-01-14 | E-MTAB-9014 | biostudies-arrayexpress