Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

DNA methylation profiling of whole blood DNA samples from BRCA1 wild-types without breast cancer and BRCA1 mutants with and without breast cancer (Prague Set 1)

ABSTRACT: The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in whole blood DNA samples from 84 women (42 BRCA1 wild-type and healthy, 7 BRCA1 mutants and healthy, 35 BRCA1 mutants with breast cancer) whole blood DNA from women, with and without breast cancer, and with or without BRCA1 mutation Bisulphite converted DNA from the whole blood samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2 The BRCA1 mutation status represent 0=healthy-brca1wt, 1=healthy-brca1mt, 2=breastcancer-brca1mt.

ORGANISM(S): Homo sapiens

SUBMITTER: Andrew Teschendorff 

PROVIDER: E-GEOD-57285 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml

Similar Datasets

Methylation profiling DNA methylation profiling of whole blood DNA samples from BRCA1 wild-types without breast cancer and BRCA1 mutants with and without breast cancer (Prague Set 1)
2014-05-06 | GSE57285 | GEO
Transcriptomics Epigenome analysis of white blood cells from healthy women with and without BRCA1 mutation.
2012-02-20 | E-GEOD-32396 | biostudies-arrayexpress
Methylation profiling Epigenome analysis of white blood cells from healthy women with and without BRCA1 mutation.
2012-02-20 | GSE32396 | GEO
Transcriptomics Epigenome analysis of breast tissue from women with and without breast cancer.
2012-02-20 | E-GEOD-32393 | biostudies-arrayexpress
Transcriptomics DNA methylation profiling of serum DNA samples of the UKCTOCS cohort
2014-06-03 | E-GEOD-58119 | biostudies-arrayexpress
Methylation profiling DNA methylation profiling of serum DNA samples of the UKCTOCS cohort
2014-06-03 | GSE58119 | GEO
Transcriptomics Genome wide DNA methylation profiling of United Kingdom Ovarian Cancer Population Study (UKOPS)
2010-05-07 | E-GEOD-19711 | biostudies-arrayexpress
Methylation profiling Genome wide DNA methylation profiling of United Kingdom Ovarian Cancer Population Study (UKOPS)
2010-03-01 | GSE19711 | GEO
Methylation profiling Epigenome analysis of breast tissue from women with and without breast cancer.
2012-02-20 | GSE32393 | GEO
Transcriptomics Epigenome analysis of endometrium tissue from women with metastatic endometrial cancer.
2012-02-20 | E-GEOD-33422 | biostudies-arrayexpress