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Transcription profiling of Arabidopsis brm-101 and syd-2 mutants 10 day old seedlings

ABSTRACT: Global analysis of gene expression in 10 day old brm-101 and syd-2 mutant seedlings compared to wild type Landsberg erecta seedlings. Experiment Overall Design: 3 genotypes (2 mutant, 1 wild type), 2 replicates each

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Doris Wagner

PROVIDER: E-GEOD-5806 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Unique, shared, and redundant roles for the Arabidopsis SWI/SNF chromatin remodeling ATPases BRAHMA and SPLAYED.

Bezhani Staver S Winter Cara C Hershman Steve S Wagner John D JD Kennedy John F JF Kwon Chang Seob CS Pfluger Jennifer J Su Yanhui Y Wagner Doris D

The Plant cell 20070209 2

Chromatin remodeling is emerging as a central mechanism for patterning and differentiation in multicellular eukaryotes. SWI/SNF chromatin remodeling ATPases are conserved in the animal and plant kingdom and regulate transcriptional programs in response to endogenous and exogenous cues. In contrast with their metazoan orthologs, null mutants in two Arabidopsis thaliana SWI/SNF ATPases, BRAHMA (BRM) and SPLAYED (SYD), are viable, facilitating investigation of their role in the organism. Previous a ...[more]

PMID: 17293567

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Identification of differentially expressed genes in brm-101 and syd-2 mutants

Project description:Global analysis of gene expression in 10 day old brm-101 and syd-2 mutant seedlings compared to wild type Landsberg erecta seedlings. Keywords: mutant analysis

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Wide-type, brm, clf, and brm clf mutant seedlings

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2015-03-09 | E-GEOD-53620 | biostudies-arrayexpress

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RNA-seq Analysis of 14-day-old WT, bcl7a(brip3), bcl7b(brip4), bcl7a bcl7b(brip3 brip4), bcl7a bcl7b brm-3(brip3 brip4 brm-3) and bcl7a bcl7b brm-1(brip3 brip4 brm-1) seedlings under short day condition

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Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brd1,2,13 and brm-1 brd1,2,13 seedlings

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