Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription profiling of human HepG2 cell line overexpressing miR-124 sampled at multiple times points to study the targets and functions of miR-124


ABSTRACT: This time course analysis is to study the targets and functions of miR-124. MiR-124 was overexpressed and the effect of miR-124 overexpression was compared to negative controls to identify downregulated genes and potential miRNA targets. Experiment Overall Design: one array for each time point of miR-124 and negative control transfections

ORGANISM(S): Homo sapiens

SUBMITTER: Xiaowei Wang 

PROVIDER: E-GEOD-6207 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Systematic identification of microRNA functions by combining target prediction and expression profiling.

Wang Xiaowei X   Wang Xiaohui X  

Nucleic acids research 20060320 5


Target predictions and validations are major obstacles facing microRNA (miRNA) researchers. Animal miRNA target prediction is challenging because of limited miRNA sequence complementarity to the targets. In addition, only a small number of predicted targets have been experimentally validated and the miRNA mechanism is poorly understood. Here we present a novel algorithm for animal miRNA target prediction. The algorithm combines relevant parameters for miRNA target recognition and heuristically a  ...[more]

Similar Datasets

2006-11-03 | GSE6207 | GEO
2024-10-13 | PXD042371 | Pride
2019-09-18 | GSE123311 | GEO
2021-05-25 | GSE161240 | GEO
2021-05-25 | GSE161239 | GEO
2021-05-25 | GSE161238 | GEO
2018-10-09 | GSE118315 | GEO
2021-05-25 | GSE161237 | GEO
2018-10-08 | GSE118310 | GEO
2018-10-08 | GSE118307 | GEO