Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Tbx15 Controls Skeletal Muscle Fiber Type Determination and Muscle Metabolism


ABSTRACT: Skeletal muscle is composed of both slow-twich oxidative myofibers and fast-twitch glycolytic myofibers that differentially impact muscle metabolism, function, and eventually whole-body physiology. In the present study, we find that the mesodermal transcription factor T-box 15 (Tbx15) is highly and specifically expressed in glycolytic myofibers. Ablation of Tbx15 in vivo leads to a decrease in muscle size due to a decrease in the number of glycolytic fibers, associated with a small increase in the number of oxidative fibers. This shift in fiber composition results in muscles with slower myofiber contraction and relaxation, and also results in decreased whole-body oxygen consumption, decreased spontaneous activity, increased adiposity, and glucose intolerance. In order to identify genes regulated by Tbx15, we utilized C2C12 myoblasts with either a stable retroviral over-expression or stable lentiviral knockdown of Tbx15. RNA was extracted and biotin labelled complementary RNA (cRNA) was prepared from three independent transfections of the four stable C2C12 myoblast cell lines: shTbx15, shGFP, pBABE-Empty-puro, pBABE-Tbx15-puro. Cells were collected at 90% confluency, and subjected to microarray analysis. Affymetrix M430 2.0 Chips were used.

ORGANISM(S): Mus musculus

SUBMITTER: Kevin Lee 

PROVIDER: E-GEOD-70489 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2014-06-17 | E-MTAB-2087 | biostudies-arrayexpress
2015-07-03 | GSE70489 | GEO
2014-05-28 | E-GEOD-51043 | biostudies-arrayexpress
2004-05-24 | GSE841 | GEO
2014-05-01 | E-GEOD-56079 | biostudies-arrayexpress
2020-06-10 | GSE136579 | GEO
2022-11-17 | GSE213996 | GEO
2013-03-08 | E-GEOD-41877 | biostudies-arrayexpress
2022-04-28 | MSV000089327 | MassIVE
2015-11-25 | E-GEOD-21498 | biostudies-arrayexpress