Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Expression data from Arabidopsis wild-type, KO-nudx6, KO-nudx7, and double KO-nudx6/7 plants


ABSTRACT: Arabidopsis Nudix hydrolases, AtNUDX6 and 7, exhibit pyrophosphohydrolase activities toward NADH and contribute to the modulation of various defense responses, such as the poly(ADP-ribosyl)ation (PAR) reaction and salicylic acid (SA)-induced Nonexpresser of Pathogenesis-Related genes 1 (NPR1)-dependent defense pathway, against biotic and abiotic stresses. To identify genes (NRGs) whose expression levels positively and negatively correlated with NADH levels, a transcriptome analysis using KO-nudx6, KO-nudx7, and double KO-nudx6/7 plants, in which intracellular NADH levels increased in a step-wise manner. Arabidopsis wild-type, KO-nudx6, KO-nudx7, and double KO-nudx6/7 plants were grown on MS medium in a growth chamber kept at 23°C during 16 h of light (100 µmol/m2/s) and at 22°C during 8 h of darkness. Two-week-old cotyledons were collected as samples for microarray analysis.

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Kazuya Yoshimura 

PROVIDER: E-GEOD-74346 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2015-10-28 | GSE74346 | GEO
2015-01-15 | E-GEOD-64968 | biostudies-arrayexpress
2011-03-25 | E-GEOD-28183 | biostudies-arrayexpress
2011-09-07 | E-GEOD-31993 | biostudies-arrayexpress
2014-03-28 | E-GEOD-56321 | biostudies-arrayexpress
2023-09-27 | GSE239457 | GEO
| PRJNA521986 | ENA
2013-09-14 | E-GEOD-50857 | biostudies-arrayexpress
| 91122 | ecrin-mdr-crc
2015-03-02 | E-GEOD-56063 | biostudies-arrayexpress