Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

AroA deficient Salmonella Typhimurium – More than an auxotrophic mutant


ABSTRACT: Recombinant attenuated Salmonella are believed to act as powerful live vaccine carrier able to elicit protection against many infectious agents. ∆aroA exhibits auxotrophy for aromatic amino acids and is commonly used for attenuation. Interestingly, deletion of aroA dramatically increased virulence of the Salmonella. Detailed analyses demonstrate that Salmonella’s physiology is significantly altered, most likely due to osmotic imbalance and stress. The result is a serious influence of lipid and amino acid turn over, possible increasing sensitivity to penicillin, complement and phagocytic uptake. In addition, in concert with other immunomodulating mutations, the phase of flagella expression is changed. Furthermore, virulence associated genes like arnT or ansB were affected. These alterations could explain the increased virulence. Thus, intravenous application of ∆aroA Salmonella to mice significantly increased induction of pro-inflammatory cytokines. We also employed such bacteria in therapy against tumors and realized that ∆aroA strains display an improved anti-tumor activity. The samples of Salmonella Typhimurium Wild type strain and derivates (SF100 (ΔlpxR9 ΔpagL7 ΔpagP8), SF101 (ΔaroA), SF102 (ΔlpxR9 ΔpagL7 ΔpagP8 ΔaroA)) were analyzed by RNA-seq. The control samples were cultivated in the LB medium until the exponential phase. Four biological replicas were pooled in pairs to get two replicas for RNA extraction, library preparation and sequencing. Tumor samples were collected from mice infected with Wt Salmonella and SF102. Bacterial RNA was extracted from single tumors. The tumor samples were split into two technical replicas for sequencing library preparation.

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium

SUBMITTER: Denitsa Eckweiler 

PROVIDER: E-GEOD-74433 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2016-08-09 | GSE74433 | GEO
2018-01-28 | GSE102111 | GEO
2016-08-10 | E-GEOD-71907 | biostudies-arrayexpress
2013-03-26 | E-GEOD-45445 | biostudies-arrayexpress
2015-12-11 | E-GEOD-67947 | biostudies-arrayexpress
2015-12-11 | E-GEOD-67949 | biostudies-arrayexpress
2017-05-03 | PXD003589 | Pride
2016-03-11 | PXD003495 | Pride
2020-09-23 | PXD014955 | Pride
2012-05-31 | E-GEOD-38353 | biostudies-arrayexpress