Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of mouse gastric mucosa from Mastomys treated for different time periods with Loxtidine

ABSTRACT: Analysis of gene expression in gastric mucosa from Mastomys treated for different time periods with Loxtidine

ORGANISM(S): Mastomys natalensis

SUBMITTER: Mark Kidd

PROVIDER: E-GEOD-941 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

gastric mucosa

Project description:gastric mucosa Raw sequence reads

| PRJNA508819 | ENA

Comprehensive gene expression analysis using gastric mucosa with autoimmune gastritis

Project description:In this study, we aimed to reveal whether gastric mucosa with AIG has a specific gene expression profile, involving in its histology and chronic inflammation. To approach this, we performed comprehensive analysis of gene expression using gastric mucosa with atuoimmune gastritis, that with H. pylori-associated gastritis and healthy mucosa without any inflammation. Potential mechanisms of the gene expression changes in gastric mucosa with AIG were also explored.

2024-01-01 | GSE233973 | GEO

Genome-wide DNA methylation analysis of gastric mucosa with autoimmune gastritis

Project description:DNA methylation in gastric mucosa with autoimmune gastritis and H. pylori-associated gastritis and normal gastric mucosa

2022-01-26 | GSE178925 | GEO

Time course RNA−seq analysis during gastric organoids with muscularis mucosa induction derived from hiPSC

Project description:We report time course analysys during gastric organoids with muscularis mucosa induction derived from hiPSC by RNA-seq.

2022-03-22 | GSE192526 | GEO

Transcription profiling by array of human gastric cancer cell lines and normal gastric mucosa

Project description:expression profiles of 9 gastric cancer cell lines and normal gastric mucosa are studied.

2011-04-01 | E-MEXP-2694 | biostudies-arrayexpress

Transcription profiling of human gastric tumors and adjacent non-cancerous mucosa compared to gastric mucosa in healthy individuals

Project description:Gastric Carcinoma is a very serious condition. Tumors are often not detected until late, and 5-year survival rates are 20%. Early diagnosis or prediction of gastric cancer is of outmost importance. Molecularly, those tumours are not well characterized. <br><br> Aim: by use of cDNA microarray to do a three-way comparison of gene expression patterns between tumour (T), flat (non-cancerous) mucosa (N) from stomachs with carcinoma, and normal mucosa in matched controls (K). Our first goal was to look at genes commonly differentially expressed between TvsN and TvsK (both criteria fulfilled) and NvsK. <br><br> Subjects and methods: We analyzed gene expression in tumor and flat mucosa biopsies from seven patients with gastric carcinoma and in age/sex matched samples from healthy individuals. Total RNA was extracted and samples (2 ug total RNA) were labeled for cDNA microarray analysis using Genisphere's 3DNA dendrimer kit. The gene expression patterns for 12759 genes were analyzed.

2008-12-12 | E-MEXP-1164 | biostudies-arrayexpress

Helicobacter pylori strain:gastric mucosa of a patient with gastric ulcer | isolate:gastric mucosa of a patient with gastric ulcer

Project description:Helicobacter pylori strain:gastric mucosa of a patient with gastric ulcer | isolate:gastric mucosa of a patient with gastric ulcer Genome sequencing

| PRJNA973247 | ENA

scATAC-seq analysis using gastric mucosa with intestinal metaplasia

Project description:Nucleosome positionings of gastric mucosa with intestinal metaplasia at single cell resolution

2023-10-01 | GSE221292 | GEO

Gene expression changes in patient-matched gastric normal mucosa, adenomas, and carcinomas

Project description:sequential changes in gene expression profiles in the gastric adenoma-carcinoma sequence by analyzing eight patient-matched gastric normal mucosa, adenomas and carcinomas. We examined gene expression changes during the gastric adenoma-carcinoma sequence in 26 snap-frozen samples (normal mucosa, adenoma, and carcinoma samples from eight patients and two additional carcinomas) by oligonucleotide microarray

2010-09-27 | E-GEOD-24375 | biostudies-arrayexpress

Lasp1 gene deletion: Effect on gene expression in the gastric mucosa

Project description:Comparative analysis of gene expression in murine gastric fundic mucosa in wild-type and Lasp1-null littermates. The data provide a comprehensive overview of genes expressed in the mouse gastric mucosa and show that the expression of several known and unidentified genes is modified by disruption of the Lasp1 gene. Keywords: Genotypic comparison

2009-02-13 | GSE14813 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data