Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

34 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of S. cerevisiae, S. pastorianus and S. bayanus

ABSTRACT: validation of S. pastorianus microarray and expression profiling of S. pastorianus

ORGANISM(S): Saccharomyces pastorianus

SUBMITTER: Satoshi Yoshida

PROVIDER: E-MEXP-1693 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of young and old yeast cells grown in pH controlled and uncontrolled media.

Project description:A 2 x 2 factorial design was used to elucidate the genome-wide transcriptional responses of old and young cells to the medium pH control. ?HO strain (BY4742 background) was cultivated batch-wise in SDC media and in fully controlled fermenters. pH was maintained at 4.5 via automatic NaOH addition for pH controlled case while this control was turned off for the unbuffered experiments. Samples of the young and old cells, collected at the 3rd and 7th day of the experiment respectively, were transferred to stimulating media containing fresh SDC medium prior to sample collection for transcriptional profiling.

2014-01-12 | E-MEXP-3972 | biostudies-arrayexpress

Transcription profiling by array of yeast haploid Sigma1278b strains to detect Yak1-regulated genes

Project description:We determined and classified Yak1-regulated genes in haploid strains of the Sigma1278b genetic background under vegetative growth conditions. For this purpose, we measured transcriptional profiles of different haploid MATa yeast strains of the following genotypes:YAK1 (468=YHUM0468), yak1 (1313=YHUM1313), strain YHUM1313 (yak1) carrying a high copy plasmid with YAK1 (1313Yhc) and strain YHUM1313 (yak1) carrying a high copy plasmid with YAK1 K398R (1313KDhc). All strains were grown in duplicate in YNB medium supplemented with tryptophan at 30 degrees Celsius to an optical density of 1.0 before extraction of total RNA and transcriptional profiling.

2011-08-23 | E-MEXP-2885 | biostudies-arrayexpress

Schladebeck_Whi3_Ploidy

Project description:We analyzed and classified Whi3-regulated and ploidy-regulated genes in haploid and diploid strains of the Sigma1278b genetic background under vegetative growth conditions.<br><br>For this purpose, we measured transcriptional profiles of two different haploid MATa and one diploid MATa/a yeast strains of the following genotypes: WHI3 strain (SS_YHUM468=YHUM0468), whi3 strain (SS_ySS137=YHUM1920) and whi3-delta/whi3-delta strain (SS_ySS137dipl=YHUM2152). All three strains were grown in duplicate in YNB medium supplemented with tryptophan and uracil at 30 degrees C to an optical density of 1.0 before extraction of total RNA and transcriptional profiling<br><br>

2013-06-19 | E-MEXP-3610 | biostudies-arrayexpress

Transcription profiling of E. coli CSH50 wild type and hupA::cm hupB::kan double mutant cells

Project description:Comparison of transcript profiles of E. coli CSH50 wild-type and CSH50 hupA::cm hupB::kan double mutant cells to distinguish between the genes expressed either in the presence or absence of HU during log phase.

2008-12-01 | E-MEXP-1742 | biostudies-arrayexpress

Transcription profiling time series of D.melanogaster testis

Project description:Gene transcription in Drosophila melanogaster testis was compared at different stages of development.

2010-01-01 | E-MEXP-1980 | biostudies-arrayexpress

Transcription profiling of yeast in stationary phase

Project description:Gene expression vs. DNA turnover in prolonged stationary phase Saccharomyces cerevisiae

2008-12-31 | E-MEXP-1938 | biostudies-arrayexpress

Transcription profiling, CGH and ChIP-chip of two interbreeding yeast strains reveals complex genetics of conditional essential genes

Project description:Comparison of the transcriptional profile for Sigma1278b and S288c strains of yeast using tiling microarrays.

2010-09-01 | E-MEXP-2264 | biostudies-arrayexpress

Transcription profiling by array of mouse bone marrow proB cells treated with IL-7 or CpG

Project description:Culture of proB cells with IL7 in the presence or absence of CpG

2010-02-27 | E-MEXP-2595 | biostudies-arrayexpress

HpHap4 proteins in the context of Sc delta hap4 mutant

Project description:The effect of overexpression HpHAP4-A, HpHAP4-B and ScHAP4 in Sc delta hap4 genetic background.

2011-06-19 | E-MEXP-3173 | biostudies-arrayexpress

Transcription profiling of human gastric cancer cells after treatment with 5-aza-2-deoxycytidine and 4-phenylbutyric acid

Project description:Gene expression profiling in human gastric cancer cells after 5-aza-2'-deoxycytidine (5-Aza-CdR) and 4-phenylbutyric acid (PBA) treatment was analyzed to investigate what genes are controlled by these chromatin modifying drug

2008-10-09 | E-MEXP-1821 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data