Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of E. coli during lag phase of cells previously starved in stationary phase for 1 day (young cells) or 16 days (old cells)


ABSTRACT: transcriptional response during lag phase (several time points) of bacterial cells starved previously in stationary phase for 1 day (young cells) and 16 days (old cells)

ORGANISM(S): Escherichia coli

SUBMITTER: carmen pin 

PROVIDER: E-MEXP-2379 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Network analysis of the transcriptional pattern of young and old cells of Escherichia coli during lag phase.

Pin Carmen C   Rolfe Matthew D MD   Muñoz-Cuevas Marina M   Hinton Jay C D JC   Peck Michael W MW   Walton Nicholas J NJ   Baranyi József J  

BMC systems biology 20091116


<h4>Background</h4>The aging process of bacteria in stationary phase is halted if cells are subcultured and enter lag phase and it is then followed by cellular division. Network science has been applied to analyse the transcriptional response, during lag phase, of bacterial cells starved previously in stationary phase for 1 day (young cells) and 16 days (old cells).<h4>Results</h4>A genome scale network was constructed for E. coli K-12 by connecting genes with operons, transcription and sigma fa  ...[more]

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