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Comparative genomic hybridization of Emiliania huxleyi to investigate the genetic diversity

ABSTRACT: Investigation of the genetic diversity of Emiliania huxleyi, genomic DNA from 15 different strains were compared with the genomic DNA of the sequenced E. huxleyi strain CCMP1516. Gephyrocapsa oceanica and Isochrysis galbana as phylogenetic closely related taxa were used as out-groups.

ORGANISM(S): Isochrysis galbana

SUBMITTER: Jessica Kegel 

PROVIDER: E-MEXP-2388 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Genome variations associated with viral susceptibility and calcification in Emiliania huxleyi.

Kegel Jessica U JU   John Uwe U   Valentin Klaus K   Frickenhaus Stephan S  

PloS one 20131119 11

Emiliania huxleyi, a key player in the global carbon cycle is one of the best studied coccolithophores with respect to biogeochemical cycles, climatology, and host-virus interactions. Strains of E. huxleyi show phenotypic plasticity regarding growth behaviour, light-response, calcification, acidification, and virus susceptibility. This phenomenon is likely a consequence of genomic differences, or transcriptomic responses, to environmental conditions or threats such as viral infections. We used a  ...[more]

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