Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Microarray analysis of gene expression of wild-type and Li2 mutant fibers during initiation or early elongation


ABSTRACT: Gene expression profiling of wild-type and Li2 mutants were investigated with Affymetrix cotton Genome Array focused primarily on time-points related to fiber elongation, more specifically, 8 and 12 days post anthesis (DPA). These time points typically represent peak rates of elongation and the beginning of the transition stage when fibers are still elongating at lower rates. An additional time-point day of anthesis (DOA) was added to the microarray experiment to serve as a reference and also to confirm that there were no significant differences in fiber initiation at the gene expression level.

ORGANISM(S): Gossypium hirsutum

SUBMITTER: Yuhong Tang 

PROVIDER: E-MEXP-3306 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Integrated metabolomics and genomics analysis provides new insights into the fiber elongation process in Ligon lintless-2 mutant cotton (Gossypium hirsutum L.).

Naoumkina Marina M   Hinchliffe Doug J DJ   Turley Rickie B RB   Bland John M JM   Fang David D DD  

BMC genomics 20130307


<h4>Background</h4>The length of cotton fiber is an important agronomic trait characteristic that directly affects the quality of yarn and fabric. The cotton (Gossypium hirsutum L.) fiber mutation, Ligon lintless-2, is controlled by a single dominant gene (Li(2)) and results in extremely shortened lint fibers on mature seeds with no visible pleiotropic effects on vegetative growth and development. The Li(2) mutant phenotype provides an ideal model system to study fiber elongation. To understand  ...[more]

Similar Datasets

2014-05-01 | E-MEXP-3901 | biostudies-arrayexpress
2012-05-23 | E-GEOD-18028 | biostudies-arrayexpress
2017-08-28 | PXD006604 | Pride
2015-06-26 | E-GEOD-64958 | biostudies-arrayexpress
2010-12-03 | E-GEOD-25773 | biostudies-arrayexpress
2007-02-17 | E-GEOD-6103 | biostudies-arrayexpress
2013-06-14 | E-GEOD-38490 | biostudies-arrayexpress
2010-06-25 | E-GEOD-10228 | biostudies-arrayexpress
2021-01-20 | PXD021317 | Pride
2009-05-29 | E-MEXP-1643 | biostudies-arrayexpress