Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

44 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome comparison between S. agalactiae strains CF01173 and A909

ABSTRACT: Strains A909 (ST7 strain isolated from human) and CF01173 (ST7 strain isolated from fish) were grown in TH medium at 37C and harvested at OD 0.3-0.4. Please note: ST7 refers to MLST types commonly used in S.agalactiae as a first approach for phylogenomic relationships (MLST is based on the sequence of 7 genes).

ORGANISM(S): Streptococcus agalactiae

SUBMITTER: Isabelle Rosinski Chupin

PROVIDER: E-MEXP-3830 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcriptome comparison between S. agalactiae strains 2-22 and A909

Project description:Strains 2-22 (S. agalactiae ST261 isolated from fish) and A909 (ST7) were grown in TH medium, at 30C and harvested at OD 0.3-0.4. Please note: ST261 and ST7 refer to MLST types commonly used in S.agalactiae as a first approach for phylogenomic relationships (MLST is based on the sequence of 7 genes).

2013-03-01 | E-MEXP-3828 | biostudies-arrayexpress

Transcriptome comparison between S. agalactiae strains SS1219 and A909

Project description:S. agalactiae strains A909 (ST7 isolated from human) and SS1219 (ST260 isolated from fish) were grown in TH medium at 30C and harvested at OD 0.3-0.4

2013-03-01 | E-MEXP-3829 | biostudies-arrayexpress

Transcription profiling by array of abx1 deletion or over expression in Streptococcus agalactiae and comparision with the effect of CovS and CovR deletion

Project description:Analysis of the impact of the abx1 deletion or over expression on S. agalactaie transcription profile and comparision to the effect of CovS and CovR deletion on transcriptomic profile. Some of the mutants are gene_knock_out mutants, but in other strains we have tested the over expression of the Abx1 protein by an chromosomic overexpression, or by a plasmid overexpression. Chromosomic overexpression is indicated with a K and plasmid overexpression with a V.

2013-02-26 | E-MEXP-3703 | biostudies-arrayexpress

Analysis of Streptococcus agalactiae response to dltA mutation the role of DltR

Project description:Analysis of S. agalactiae response to dltA mutation the role of DltR. This analysis is based on the comparison of the effect of dltA and dltR mutation on S. agalactiae transcription profile.

2014-05-25 | E-MEXP-3317 | biostudies-arrayexpress

rogB mutant in NEM316 S. agalactiae strain

Project description:transcritpomic analysis of rogB mutant in NEM316 S. agalactiae strain

2012-05-21 | E-MEXP-3237 | biostudies-arrayexpress

rga response

Project description:comparison of the transcriptionnal response of the rga mutant and the wild type in S. agalactiae NEM316 strain

2012-05-21 | E-MEXP-3236 | biostudies-arrayexpress

CovRS response in S. agalactiae NEM316 strain

Project description:Analysis of the CovRS response in S. agalactiae NEM316 strain with microarrays

2012-05-21 | E-MEXP-3304 | biostudies-arrayexpress

Role of RelRS and CiaRH in D-alanylation absence response

Project description:Role of RelRS and CiaRH in D-alanylation absence response by the comparison of the double mutant dltACiaRH and dltArelRS against the single mutant dltA

2014-05-25 | E-MEXP-3318 | biostudies-arrayexpress

Impact of RelRS and CiaRH deletion in transcription profiling in a wild-type background

Project description:Impact of two TCS RelRS and CiaRH deletion in transcription profiling in a wild-type background

2014-05-25 | E-MEXP-3319 | biostudies-arrayexpress

Transcription profiling by array of yeast after treatment with pyrrolidine dithiocarbamate (PDTC) for 1, 3 or 5 hours

Project description:Effects of the compound Pyrrolidine dithiocarbamate (PDTC) on the gene expression of Saccharomyces cerevisiae after incubation times of 1, 3 and 5 hours with 75uM PDTC.

2010-08-12 | E-MEXP-2864 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data