Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription profiling of Arabidopsis Col-0 plants with wild type, arr1-1 knock-out, ARR1 over-expressor and ARR1-SRDX fusion protein over-expressor genotypes treated with 6-Benzyladenine for different lengths of time

ABSTRACT: Arabidopsis thaliana Col-0 plants and three other genotypes (ARR1 overexpressor, arr1-1 knockout, overexpressor of ARR1-SRDX fusion protein) were grown in liquid media (1/2 MS, 1 g/L sucrose, 0.5 g/L MES, pH 5.7) in a Percival AR-66L growth chamber at 24 oC, 16:8 h day:night cycle, and 100 µE light intensity until growth stage 1.0. Plants were then treated with 5 µM 6-Benzyladenine for 0, 15, and 120 min, harvested and frozen in liquid nitrogen for RNA extraction and subsequent processing for microarray hybridization.

INSTRUMENT(S): Scanning hardware

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Wolfram Brenner 

PROVIDER: E-MEXP-689 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

In planta analysis of a cis-regulatory cytokinin response motif in Arabidopsis and identification of a novel enhancer sequence.

Ramireddy Eswarayya E   Brenner Wolfram G WG   Pfeifer Andreas A   Heyl Alexander A   Schmülling Thomas T  

Plant & cell physiology 20130424 7

The phytohormone cytokinin plays a key role in regulating plant growth and development, and is involved in numerous physiological responses to environmental changes. The type-B response regulators, which regulate the transcription of cytokinin response genes, are a part of the cytokinin signaling system. Arabidopsis thaliana encodes 11 type-B response regulators (type-B ARRs), and some of them were shown to bind in vitro to the core cytokinin response motif (CRM) 5'-(A/G)GAT(T/C)-3' or, in the c  ...[more]

Similar Datasets

Transcriptomics Transcription profiling of Arabidopsis thaliana ecotype Col-0 vs Arabidopsis thaliana ecotype Ler, both grown to Boyes scale 1.04 performed at VIB
2005-01-01 | E-CAGE-10 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Arabidopsis self vs self experiment Col-0 vs Col-0 samples performed at MPI
2005-01-01 | E-CAGE-6 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Arabidopsis Col-0 vs Ler samples performed at MPI
2005-01-01 | E-CAGE-7 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Arabidopsis self vs self experiment Col-0 vs Col-0 samples performed at MPI
2005-01-01 | E-CAGE-5 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Arabidopsis elf self experiment Col-0 vs Col-0 samples performed at MPI
2005-01-01 | E-CAGE-8 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Arabidopsis elf self experiment Col-0 vs Col-0 samples performed at MPI
2005-01-01 | E-CAGE-9 | biostudies-arrayexpress
Transcriptomics Transcription profiling of leaves 1 and 2 from Arabidopsis plants treated with naphtylacetic acid and incubated for 15 mins or 2 hours
2007-05-16 | E-CAGE-46 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Arabidopsis leaves 1 and 2 at Boyes stages 1.04 and 1.08 in response to treatment with Abscisic acid
2006-10-31 | E-CAGE-48 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Arabidopsis plants (tup3 mutant and Col-0gl) in cotyledon stage after treatmeant with cytokinin or auxin for different times
2006-10-31 | E-CAGE-49 | biostudies-arrayexpress
Transcriptomics Transcription profiling of flowers from Arabidopsis thaliana Col-0 at developmental stage Boyes Key 6.10
2007-01-11 | E-CAGE-22 | biostudies-arrayexpress