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Genotyping data of French wild boar populations using a porcine genomic beadchip array

ABSTRACT: All-genome genotyping data from French wild boar populations could be useful for diversity studies in the wild boar species as well as for phylogeny studies with domestic pig populations. The data produced in this experiment concern 362 wild boars collected between 2013 and 2019 in various French departments. The biological samples that were collected were either blood samples or ear biopsies. Genomic DNA was extracted from cells after proteinase K lysis and ethanol precipitation. DNA was hybridized on the GeneSeek Genomic Profiler porcine beadchip (GGP70K HD Porcine Illumina) using Infinium technology. Fluorescence intensity data obtained for each Single Nucleotide Polymorphism were analyzed with GenomeStudio software to infer genotypes. In addition, the raw fluorescence data could be useful for Copy Number Variation studies.

ORGANISM(S): Sus scrofa scrofa

SUBMITTER: Nathalie Iannuccelli

PROVIDER: E-MTAB-10591 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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