RNA sequencing of rice root in salt stress condition (250mM NaCl treatment)

ABSTRACT: Soil salinity is a major production constrain for agricultural crops, especially in Oryza sativa (rice). Analyzing physiological effect and molecular mechanism under salt stress is key for developing stress-tolerant plants. Roots system has a major role in coping with the osmotic change impacted by salinity and few salt-stress-related transcriptome studies in rice have been previously reported. However, transcriptome data sets using rice roots grown in soil condition are more relevant for further applications, but have not yet been available. The present work analyzed rice root and shoot physiological characteristics in response to salt stress using 250 mM NaCl for different timepoints. Subsequently, we identified that 5 day treatment is critical timepoint for stress response in the specif

INSTRUMENT(S): Illumina HiSeq 2500

ORGANISM(S): Oryza sativa Japonica Group

SUBMITTER: Eui-Jung Kim 

PROVIDER: E-MTAB-10653 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress