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RNA-seq of Pseudomonas aeruginosa treated with Melastoma dodecandrum Lour and antibiotics

ABSTRACT: We wanted to measure the transcriptomic changes of P.aeruginosa (PAO1 strain) when treated with plant extracts (Melastoma dodecandrum Lour, and Potentilla indica) and antibiotics (triclosan, rifampicin, gentamicin and ciprofloxacin) against DMSO control to aid in understanding the mode of action of our plant extracts. PAO1 samples were treated with plant extracts and antibiotics at MIC, for 24h at 37°C with OD readings taken at 600 nm every 10 mins using a microplate reader.

INSTRUMENT(S): NovaSeq PE150, RNeasy Plus Kit (Qiagen), Illumina NovaSeq 6000

ORGANISM(S): Pseudomonas aeruginosa PAO1

SUBMITTER: Dr. Marek Mutwil

PROVIDER: E-MTAB-12652 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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