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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Single cell RNA sequencing of colon in germ-free and specific pathogen free mice

ABSTRACT: The goal of this study is to understand the effect of microbiota on the cell frequencies and gene expression in the colon. To achieve that we performed single cell sequencing of colon epithelium and lamina propria cells from germ-free (GF) and specific pathogen free (SPF) mice

INSTRUMENT(S): 10x Genomics Chromium, Illumina NovaSeq 6000, manual

ORGANISM(S): Mus musculus

SUBMITTER:

PROVIDER: E-MTAB-13015 | biostudies-arrayexpress |

SECONDARY ACCESSION(S): E-MTAB-13005

REPOSITORIES: biostudies-arrayexpress

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