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Expression profiling of the moss F. hygrometrica

ABSTRACT: We experimentally generated a genome-wide gene expression data. To this end, we first collected samples of three important haploid developmental stages, specifically germinating spores (gametophyte_1), protonemata (gametophyte_2) and young gametophores (gametophyte_3) (four biological replicates each). We also collected three developmental stages of the diploid phase (sporophyte), specifically sporophytes shorter than 5mm (sporophyte_1), elongated needle-like sporophytes (sporophyte_2), and sporophytes with swollen capsules (sporophyte_3)

INSTRUMENT(S): Illumina Genome Analyzer II

ORGANISM(S): Funaria hygrometrica

SUBMITTER: Peter Szovenyi

PROVIDER: E-MTAB-1664 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Selection is no more efficient in haploid than in diploid life stages of an angiosperm and a moss.

Szövényi Péter P Ricca Mariana M Hock Zsófia Z Shaw Jonathan A JA Shimizu Kentaro K KK Wagner Andreas A

Molecular biology and evolution 20130517 8

The masking hypothesis predicts that selection is more efficient in haploids than in diploids, because dominant alleles can mask the deleterious effects of recessive alleles in diploids. However, gene expression breadth and noise can potentially counteract the effect of masking on the rate at which genes evolve. Land plants are ideal to ask whether masking, expression breadth, or expression noise dominate in their influence on the rate of molecular evolution, because they have a biphasic life cy ...[more]

PMID: 23686659

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