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Unknown,Transcriptomics,Genomics,Proteomics

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Zea mays Transcriptome or Gene expression

ABSTRACT: Alternative splicing (AS) is an important regulatory mechanism that greatly contributes to eukaryotic transcriptome diversity. A substantial amount of evidence has demonstrated that AS complexity is relevant to eukaryotic evolution, development, adaptation, and complexity. In this study, six teosinte and ten maize transcriptomes were sequenced to analyze AS changes and signatures of selection in maize domestication and improvement.

INSTRUMENT(S): Illumina Genome Analyzer II

ORGANISM(S): Zea mays subsp. mexicana

SUBMITTER: Jun Huang

PROVIDER: E-MTAB-4373 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Comparative transcriptomics uncovers alternative splicing changes and signatures of selection from maize improvement.

Huang Jun J Gao Youjun Y Jia Haitao H Liu Lei L Zhang Dan D Zhang Zuxin Z

BMC genomics 20150508

<h4>Background</h4>Alternative splicing (AS) is an important regulatory mechanism that greatly contributes to eukaryotic transcriptome diversity. A substantial amount of evidence has demonstrated that AS complexity is relevant to eukaryotic evolution, development, adaptation, and complexity. In this study, six teosinte and ten maize transcriptomes were sequenced to analyze AS changes and signatures of selection in maize domestication and improvement.<h4>Results</h4>In maize and teosinte, 13,593 ...[more]

PMID: 25952680

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