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Transcriptomic Analysis of Responses to Imbalanced Carbon:Nitrogen Availabilities in Rice Seedlings


ABSTRACT: Rice is an important model for cereals and a staple crop worldwide. Understanding C-N nutrients interaction in rice should also help to compare and contrast the mechanisms for the regulation of C:N balance between plants accumulating high levels of photosynthates such as cereals and those that do not, and importantly may provide useful knowledge for improving crop yields. By analyzing the effects of exogenous C:N availabilities on the growth of rice seedlings, we previously identified the balanced and imbalanced C:N conditions for rice seedlings. Herein, we chose four C:N ratios (1 mM:1 mM, 1 mM:60 mM, 60 mM:1 mM and 60 mM:60 mM). Among them, 1:1 and 60:60 were considered as balanced exogenous C:N while 60:1 and 1:60 were imbalanced C:N. By comparative transcriptome analysis, genes were classified into two modes: high C:low N responsive genes and low C:high N responsive genes.

ORGANISM(S): Oryza sativa Japonica Group

SUBMITTER: Aobo Huang 

PROVIDER: E-MTAB-5118 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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