Unknown,Transcriptomics,Genomics,Proteomics

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Ribosome profiling of astrovirus-infected cells


ABSTRACT: Ribosome profiling (RiboSeq) is a high-throughput sequencing technique for globally mapping the positions of translating ribosomes on the transcriptome. We infected Caco2 cells with human astrovirus 1 (HAstV1). Cells were harvested at 12 hpi and either flash frozen with no pre-treatment (NT), or pre-treated with lactimidomycin for 30 minutes followed by flash freezing (LTM). These samples where then used for ribosome profiling.

INSTRUMENT(S): NextSeq 500

ORGANISM(S): Homo sapiens

SUBMITTER: Andrew Firth 

PROVIDER: E-MTAB-8045 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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