DNA-seq or genomic RNA region of HIV-1 reverse transcriptase, protease and integrase gene
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ABSTRACT: To assess compatibility in sequence analysis we compared results from Sanger sequencing (with sequencing threshold >15%) and Next Generation Sequencing (with sequencing treshold >5%). Totally, there were 48 patients included in this part of the study but sequencing for one sample failed. Here we demonstrate how reliable tool for fast and accurate identification of low-level viral quasispecies is deep-sequencing.
INSTRUMENT(S): Illumina MiniSeq
ORGANISM(S): Homo sapiens
SUBMITTER: Maja Oroz
PROVIDER: E-MTAB-8153 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
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